Detailed information NTG0364790

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: BPGQ101_RS00640
• Genome accession: NZ_CP040514
• Coordinates: 111030..112409 (+)
• Length: 459 a.a.
• NCBI ID: WP_017359160.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain GQYP101
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 106030..117409

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BPGQ101_RS00620 (BPGQ101_00625)	-	106372..106836 (+)	465	WP_003217184.1	CtsR family transcriptional regulator	-
BPGQ101_RS00625 (BPGQ101_00630)	-	106851..107408 (+)	558	WP_007496258.1	UvrB/UvrC motif-containing protein	-
BPGQ101_RS00630 (BPGQ101_00635)	-	107413..108504 (+)	1092	WP_024718295.1	protein arginine kinase	-
BPGQ101_RS00635 (BPGQ101_00640)	clpC	108501..110936 (+)	2436	WP_007496263.1	ATP-dependent protease ATP-binding subunit ClpC	Regulator
BPGQ101_RS00640 (BPGQ101_00645)	radA	111030..112409 (+)	1380	WP_017359160.1	DNA repair protein RadA	Machinery gene
BPGQ101_RS00645 (BPGQ101_00650)	disA	112412..113491 (+)	1080	WP_007496267.1	DNA integrity scanning diadenylate cyclase DisA	-
BPGQ101_RS00650 (BPGQ101_00655)	-	113645..114745 (+)	1101	WP_047946821.1	PIN/TRAM domain-containing protein	-
BPGQ101_RS00655 (BPGQ101_00660)	ispD	114759..115448 (+)	690	WP_008345432.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
BPGQ101_RS00660 (BPGQ101_00665)	ispF	115452..115928 (+)	477	WP_007496273.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 49995.41 Da
• Isoelectric Point: 7.1218

>NTDB_id=364790 BPGQ101_RS00640 WP_017359160.1 111030..112409(+) (radA) [Bacillus altitudinis strain GQYP101]
MAKSKSKFICQSCGYESAKWMGKCPGCGTWNSMTEEVVRKEPANRRSAFNHSVQTIQKPSPISAIETSEEPRIKTNLEEF
NRVLGSGIVKGSLVLIGGDPGIGKSTLLLQVSAQLSDQNQNVLYISGEESIKQTKLRADRLGIESASLHVLAETDMEYIT
SAIQEMKPAFVVVDSIQTVYQSDITSAPGSVSQVRECTAQLMKIAKTNGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYF
EGERHHTFRILRAVKNRFGSTNELGIFEMREEGLTEVLNPSEIFLEERSAGVSGSCVVASMEGTRPVLVEIQALISPTSF
GNPRRMATGLDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAIAVSIASSFKDAAPHQADCFIGEVGLT
GEVRRVSRIEQRVQEAAKLGFKRMFIPQANIDGWKKPRGIELVGVENVAEALRISLGGS

Nucleotide

• Length: 1380 bp

>NTDB_id=364790 BPGQ101_RS00640 WP_017359160.1 111030..112409(+) (radA) [Bacillus altitudinis strain GQYP101]
ATGGCTAAGTCAAAATCAAAATTTATATGCCAATCGTGCGGTTATGAGTCAGCCAAATGGATGGGGAAATGTCCCGGCTG
CGGCACTTGGAACAGTATGACAGAAGAGGTCGTTCGTAAAGAGCCGGCAAATCGTCGAAGTGCGTTTAATCATTCTGTTC
AAACCATTCAAAAACCTTCACCTATATCTGCAATTGAAACATCCGAAGAACCCCGAATTAAAACGAATTTAGAAGAATTT
AACCGAGTATTAGGAAGTGGAATTGTCAAAGGTTCACTCGTTCTTATTGGCGGTGATCCTGGGATTGGGAAGTCCACACT
ATTATTACAAGTTTCAGCACAGCTATCAGATCAAAATCAGAATGTGTTATACATATCTGGTGAGGAATCAATCAAACAAA
CGAAGCTTAGGGCGGACCGTCTCGGTATTGAAAGTGCCTCTTTACATGTTTTGGCTGAAACCGATATGGAGTATATAACG
TCTGCTATACAAGAGATGAAACCCGCTTTTGTTGTGGTTGATTCAATTCAAACCGTTTATCAAAGCGATATCACGTCAGC
TCCTGGATCTGTTTCTCAGGTGAGGGAATGCACTGCCCAGCTGATGAAAATTGCCAAGACGAATGGTATTCCTATTTTTA
TCGTTGGTCACGTGACGAAGGAGGGCTCGATTGCTGGGCCGCGCCTTTTAGAGCATATGGTAGATACAGTTCTTTATTTT
GAAGGGGAGCGTCATCATACGTTTCGTATTTTAAGGGCAGTGAAAAACCGTTTTGGTTCAACGAATGAATTAGGAATTTT
TGAAATGAGAGAGGAAGGGCTCACAGAGGTATTAAACCCATCAGAAATCTTCTTAGAAGAGCGGTCAGCAGGTGTATCTG
GATCGTGTGTTGTTGCCTCAATGGAAGGAACAAGACCTGTTCTAGTGGAGATACAAGCACTTATTTCACCGACGAGCTTT
GGGAATCCACGGAGAATGGCTACTGGCCTTGATCATAACCGAGTGTCATTGCTTATGGCCGTTTTAGAAAAACGGGTAGG
GCTGCTACTGCAAAACCAAGATGCCTATTTAAAGGTCGCAGGTGGTGTGAAACTTGATGAACCAGCGATAGACTTGGCTA
TTGCCGTTAGTATTGCATCAAGTTTTAAAGATGCAGCGCCGCATCAAGCAGATTGCTTTATAGGAGAAGTGGGTCTGACG
GGAGAAGTCAGAAGAGTATCAAGAATTGAACAGCGTGTGCAGGAAGCTGCTAAACTAGGATTTAAGCGAATGTTTATTCC
TCAGGCGAATATAGATGGATGGAAAAAACCGAGAGGGATTGAGTTAGTCGGTGTAGAAAATGTAGCAGAGGCACTTCGTA
TTTCACTAGGGGGATCATAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (67-222)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• Subunit ChlI of Mg-chelatase (ChlI) (365-430)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	87.118	99.782	0.869
radA	Streptococcus mitis NCTC 12261	61.81	98.693	0.61
radA	Streptococcus pneumoniae Rx1	61.81	98.693	0.61
radA	Streptococcus pneumoniae D39	61.81	98.693	0.61
radA	Streptococcus pneumoniae R6	61.81	98.693	0.61
radA	Streptococcus pneumoniae TIGR4	61.81	98.693	0.61
radA	Streptococcus mitis SK321	61.81	98.693	0.61