Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BPGQ101_RS00300 | Genome accession | NZ_CP040514 |
| Coordinates | 47155..47445 (-) | Length | 96 a.a. |
| NCBI ID | WP_087975202.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain GQYP101 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 42155..52445
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BPGQ101_RS00260 (BPGQ101_00260) | - | 42188..42517 (+) | 330 | WP_012008640.1 | cyclic-di-AMP receptor | - |
| BPGQ101_RS00265 (BPGQ101_00265) | - | 42530..42970 (+) | 441 | WP_008341898.1 | YaaR family protein | - |
| BPGQ101_RS00270 (BPGQ101_00270) | holB | 42982..43971 (+) | 990 | WP_024719351.1 | DNA polymerase III subunit delta' | - |
| BPGQ101_RS00275 (BPGQ101_00275) | - | 43974..44801 (+) | 828 | WP_024719352.1 | PSP1 domain-containing protein | - |
| BPGQ101_RS00280 (BPGQ101_00280) | yabA | 44816..45169 (+) | 354 | WP_007496228.1 | DNA replication initiation control protein YabA | - |
| BPGQ101_RS00285 (BPGQ101_00285) | - | 45225..45968 (+) | 744 | WP_017359328.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BPGQ101_RS00290 (BPGQ101_00290) | - | 45955..46254 (+) | 300 | WP_019744059.1 | GIY-YIG nuclease family protein | - |
| BPGQ101_RS00295 (BPGQ101_00295) | rsmI | 46229..47110 (+) | 882 | WP_138277941.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BPGQ101_RS00300 (BPGQ101_00300) | abrB | 47155..47445 (-) | 291 | WP_087975202.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| BPGQ101_RS00305 (BPGQ101_00310) | metG | 47965..49965 (+) | 2001 | WP_041506541.1 | methionine--tRNA ligase | - |
| BPGQ101_RS00310 (BPGQ101_00315) | - | 50047..50814 (+) | 768 | WP_138277942.1 | TatD family hydrolase | - |
| BPGQ101_RS00315 (BPGQ101_00320) | - | 51059..52261 (+) | 1203 | WP_007496219.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10853.65 Da Isoelectric Point: 7.9655
>NTDB_id=364788 BPGQ101_RS00300 WP_087975202.1 47155..47445(-) (abrB) [Bacillus altitudinis strain GQYP101]
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
MKMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSREG
AEQIINEIQNQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=364788 BPGQ101_RS00300 WP_087975202.1 47155..47445(-) (abrB) [Bacillus altitudinis strain GQYP101]
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAGCTTCGACGTAC
GTTAGGAATCGCAGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
ATGAAGATGAAATCTACAGGTATTGTACGTAAAGTTGACGAATTAGGACGCGTGGTGATTCCAATCGAGCTTCGACGTAC
GTTAGGAATCGCAGAAAAAGACGCTTTGGAAATTTATGTTGATGATGAAAAAATTATCCTAAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACAGGTGAAGTATCAGACGATAACCTTAAACTTGCTAATGGTAAATTAGTTCTTAGCCGTGAAGGT
GCAGAGCAAATCATTAACGAAATCCAAAACCAACTTCAATCACAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |