Detailed information NTG0364723

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: FFD75_RS01500
• Genome accession: NZ_CP040506
• Coordinates: 317174..318535 (+)
• Length: 453 a.a.
• NCBI ID: WP_006780201.1
• Uniprot ID: -
• Organism: Hungatella hathewayi WAL-18680
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 312174..323535

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FFD75_RS01480	-	312401..312991 (+)	591	WP_006780197.1	UvrB/UvrC motif-containing protein	-
FFD75_RS01485	-	312984..314021 (+)	1038	WP_006780198.1	ATP--guanido phosphotransferase	-
FFD75_RS01490	-	314040..316499 (+)	2460	WP_006780199.1	ATP-dependent Clp protease ATP-binding subunit	-
FFD75_RS01495	-	316694..317113 (+)	420	WP_006780200.1	hypothetical protein	-
FFD75_RS01500	radA	317174..318535 (+)	1362	WP_006780201.1	DNA repair protein RadA	Machinery gene
FFD75_RS01510	-	318860..320176 (-)	1317	WP_138669366.1	hypothetical protein	-
FFD75_RS01515	-	320536..321156 (+)	621	WP_242830839.1	5-formyltetrahydrofolate cyclo-ligase	-
FFD75_RS01520	-	321419..321661 (+)	243	WP_138670072.1	HPr family phosphocarrier protein	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 49509.41 Da
• Isoelectric Point: 6.7010

>NTDB_id=364723 FFD75_RS01500 WP_006780201.1 317174..318535(+) (radA) [Hungatella hathewayi WAL-18680]
MAKAKATAFFCKECGYESSKWMGQCPGCREWNTFVEEPVGKKEPVSGRKTPLVKIKPSRIEEINIEEQDRIRTGYPELDR
VLGSGIVAGSLMLVGGDPGIGKSTLLLQVCRNLAAQGQKVLYISGEESLKQIKLRANRIGEITGALLFLCETNLDVIQGT
IEEEKPDVVVIDSIQTMFRDEVSSAPGSVSQVRESTNLLMQIAKGQGIAIFIVGHVTKEGVVAGPRVLEHMVDTVLYFEG
ERNASYRILRGVKNRFGSTNEIGVFEMQEAGLVEVANPSEYMLSGRPEGASGAVVACSLEGTRPILLEVQALVTQTNFGM
PRRTAAGTDYNRVNLLMAVLEKRCHFEMSRYDAYVNIAGGMKMNEPALDLAIVMALVSSLKDRPVDAKTIIFGEVGLSGE
VRAVSMADQRVYEAVKLGFDTCVLPQISLDKMKKTDKIRLVGVKNIREAIALL

Nucleotide

• Length: 1362 bp

>NTDB_id=364723 FFD75_RS01500 WP_006780201.1 317174..318535(+) (radA) [Hungatella hathewayi WAL-18680]
ATGGCGAAAGCGAAGGCAACCGCGTTTTTCTGCAAGGAGTGTGGTTATGAGTCTAGCAAATGGATGGGGCAGTGCCCCGG
ATGCCGGGAGTGGAACACGTTTGTGGAGGAGCCGGTGGGAAAAAAGGAGCCGGTGTCAGGGCGGAAGACACCGCTGGTGA
AGATCAAGCCCTCCCGGATCGAGGAGATTAATATTGAGGAGCAGGACAGAATCCGGACCGGGTATCCGGAGCTTGACCGG
GTACTGGGAAGCGGCATTGTGGCCGGTTCTTTGATGCTGGTGGGCGGCGACCCCGGAATTGGCAAATCCACCCTGCTGTT
ACAGGTATGCCGCAATCTGGCGGCCCAGGGGCAGAAGGTGCTCTATATCTCCGGTGAGGAGTCCTTAAAGCAGATTAAAC
TGCGGGCGAACCGCATCGGGGAGATCACCGGGGCCCTGCTGTTTCTGTGTGAGACCAATCTGGATGTGATTCAGGGGACC
ATCGAGGAGGAGAAGCCGGACGTGGTGGTGATTGACTCCATTCAGACCATGTTCCGGGACGAGGTGTCCTCGGCCCCGGG
CAGTGTGAGCCAGGTGCGGGAGTCCACCAACCTGCTGATGCAGATCGCCAAGGGCCAGGGCATCGCTATCTTTATCGTGG
GTCATGTGACGAAGGAGGGCGTGGTGGCCGGGCCTAGAGTGCTGGAGCATATGGTGGATACGGTATTGTATTTTGAGGGG
GAGAGAAATGCCTCCTACCGGATACTGCGGGGCGTGAAGAACCGGTTTGGCTCCACCAATGAAATCGGCGTGTTTGAGAT
GCAGGAGGCCGGGCTTGTTGAGGTGGCCAACCCGTCGGAGTATATGTTAAGCGGCCGGCCGGAGGGGGCCTCAGGGGCCG
TGGTGGCCTGCTCCCTGGAGGGAACCAGACCCATCCTTTTGGAAGTCCAGGCATTGGTCACCCAGACGAACTTCGGTATG
CCAAGGCGGACGGCGGCCGGTACGGACTACAACCGGGTCAACCTGCTGATGGCGGTGCTGGAAAAGCGCTGTCACTTTGA
GATGTCCCGCTACGACGCCTACGTCAACATTGCCGGCGGCATGAAGATGAACGAGCCGGCCCTGGACTTGGCCATCGTGA
TGGCGCTGGTGTCCAGCTTGAAGGACCGGCCGGTGGACGCCAAGACCATTATCTTCGGCGAGGTGGGACTCTCCGGTGAG
GTCCGGGCAGTCTCCATGGCGGACCAGCGGGTCTACGAGGCGGTGAAGCTGGGCTTCGACACCTGCGTCCTGCCCCAGAT
CAGTCTGGACAAGATGAAGAAGACGGATAAGATACGGCTGGTAGGGGTGAAGAACATCCGGGAGGCCATTGCGCTGTTAT
AG

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (68-220)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (10-36)

• Subunit ChlI of Mg-chelatase (ChlI) (342-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	56.828	100	0.57
radA	Streptococcus pneumoniae Rx1	53.187	100	0.534
radA	Streptococcus pneumoniae D39	53.187	100	0.534
radA	Streptococcus pneumoniae R6	53.187	100	0.534
radA	Streptococcus pneumoniae TIGR4	53.187	100	0.534
radA	Streptococcus mitis NCTC 12261	53.187	100	0.534
radA	Streptococcus mitis SK321	53.187	100	0.534