Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | FE773_RS07410 | Genome accession | NZ_CP040463 |
| Coordinates | 1380938..1381330 (+) | Length | 130 a.a. |
| NCBI ID | WP_007473254.1 | Uniprot ID | A0AAI9F315 |
| Organism | Caminibacter mediatlanticus TB-2 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1375938..1386330
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FE773_RS07375 (FE773_07375) | - | 1376059..1376586 (-) | 528 | WP_138323673.1 | hypothetical protein | - |
| FE773_RS07380 (FE773_07380) | ilvC | 1376654..1377676 (+) | 1023 | WP_138323674.1 | ketol-acid reductoisomerase | - |
| FE773_RS07385 (FE773_07385) | minD | 1377749..1378558 (+) | 810 | WP_138323675.1 | septum site-determining protein MinD | - |
| FE773_RS07390 (FE773_07390) | minE | 1378555..1378788 (+) | 234 | WP_007473247.1 | cell division topological specificity factor MinE | - |
| FE773_RS07395 (FE773_07395) | - | 1378792..1379790 (+) | 999 | WP_138323676.1 | divergent polysaccharide deacetylase family protein | - |
| FE773_RS07400 (FE773_07400) | - | 1379771..1380481 (+) | 711 | WP_138323677.1 | DNA-processing protein DprA | - |
| FE773_RS07405 (FE773_07405) | - | 1380450..1380965 (+) | 516 | WP_007473252.1 | DNA-deoxyinosine glycosylase | - |
| FE773_RS07410 (FE773_07410) | dprB | 1380938..1381330 (+) | 393 | WP_007473254.1 | Holliday junction resolvase RuvX | Machinery gene |
| FE773_RS07415 (FE773_07415) | - | 1381284..1382129 (-) | 846 | WP_138323678.1 | 2-dehydropantoate 2-reductase | - |
| FE773_RS07420 (FE773_07420) | - | 1382217..1383350 (-) | 1134 | WP_138323679.1 | hypothetical protein | - |
| FE773_RS07425 (FE773_07425) | - | 1383322..1384797 (-) | 1476 | WP_138323680.1 | AAA family ATPase | - |
| FE773_RS07430 (FE773_07430) | - | 1384801..1385568 (-) | 768 | WP_138323681.1 | ADP-ribosylglycohydrolase family protein | - |
Sequence
Protein
Download Length: 130 a.a. Molecular weight: 14669.10 Da Isoelectric Point: 10.2107
>NTDB_id=364672 FE773_RS07410 WP_007473254.1 1380938..1381330(+) (dprB) [Caminibacter mediatlanticus TB-2]
MERIIAIDVGLKRIGIAYTPNASVVVPLNAIIRKNRNQAAKEVSNLLKEYKADILVVGIPKTNEEMTKRIKHFTNLIDFN
GKIEFVDESFTSAIVEEEIKGKIKHKRDGRIDSLAAKKILESFLASYNKN
MERIIAIDVGLKRIGIAYTPNASVVVPLNAIIRKNRNQAAKEVSNLLKEYKADILVVGIPKTNEEMTKRIKHFTNLIDFN
GKIEFVDESFTSAIVEEEIKGKIKHKRDGRIDSLAAKKILESFLASYNKN
Nucleotide
Download Length: 393 bp
>NTDB_id=364672 FE773_RS07410 WP_007473254.1 1380938..1381330(+) (dprB) [Caminibacter mediatlanticus TB-2]
ATGGAAAGAATTATTGCAATTGATGTAGGATTAAAAAGAATAGGAATAGCTTACACTCCAAACGCTTCTGTGGTAGTCCC
TTTAAATGCAATAATTAGAAAAAATAGAAATCAAGCAGCAAAAGAGGTTAGTAATTTACTAAAAGAATATAAAGCTGATA
TTTTAGTAGTTGGAATTCCAAAAACAAATGAAGAAATGACAAAAAGAATAAAACATTTTACTAATTTAATAGATTTTAAT
GGAAAAATTGAATTTGTAGATGAAAGTTTTACATCAGCAATTGTAGAAGAAGAGATAAAAGGAAAAATAAAACACAAAAG
AGATGGCAGAATTGATAGTTTAGCTGCTAAGAAGATTTTAGAGAGTTTTTTAGCTTCTTATAATAAAAATTAA
ATGGAAAGAATTATTGCAATTGATGTAGGATTAAAAAGAATAGGAATAGCTTACACTCCAAACGCTTCTGTGGTAGTCCC
TTTAAATGCAATAATTAGAAAAAATAGAAATCAAGCAGCAAAAGAGGTTAGTAATTTACTAAAAGAATATAAAGCTGATA
TTTTAGTAGTTGGAATTCCAAAAACAAATGAAGAAATGACAAAAAGAATAAAACATTTTACTAATTTAATAGATTTTAAT
GGAAAAATTGAATTTGTAGATGAAAGTTTTACATCAGCAATTGTAGAAGAAGAGATAAAAGGAAAAATAAAACACAAAAG
AGATGGCAGAATTGATAGTTTAGCTGCTAAGAAGATTTTAGAGAGTTTTTTAGCTTCTTATAATAAAAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
47.015 |
100 |
0.485 |