Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   FE005_RS10660 Genome accession   NZ_CP040461
Coordinates   2279869..2281686 (+) Length   605 a.a.
NCBI ID   WP_113849879.1    Uniprot ID   A0AAE7MPC3
Organism   Enterococcus sp. M190262     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 2274869..2286686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FE005_RS10640 (FE005_10640) - 2275128..2276843 (+) 1716 WP_138371756.1 ABC transporter ATP-binding protein -
  FE005_RS10645 (FE005_10645) spxA 2277521..2277919 (+) 399 WP_003127030.1 transcriptional regulator SpxA -
  FE005_RS10650 (FE005_10650) - 2278074..2278724 (+) 651 WP_003127031.1 adaptor protein MecA -
  FE005_RS10655 (FE005_10655) - 2278807..2279802 (+) 996 WP_138371757.1 competence protein CoiA -
  FE005_RS10660 (FE005_10660) pepF 2279869..2281686 (+) 1818 WP_113849879.1 oligoendopeptidase F Regulator
  FE005_RS10665 (FE005_10665) - 2281873..2282121 (+) 249 WP_113849878.1 hypothetical protein -
  FE005_RS10670 (FE005_10670) - 2282226..2282882 (-) 657 WP_103299933.1 DsbA family protein -
  FE005_RS10675 (FE005_10675) - 2282971..2283564 (-) 594 WP_138371758.1 CYTH domain-containing protein -
  FE005_RS10680 (FE005_10680) - 2283760..2284413 (+) 654 WP_138371759.1 GTP pyrophosphokinase family protein -
  FE005_RS10685 (FE005_10685) - 2284419..2285216 (+) 798 WP_029486937.1 NAD kinase -
  FE005_RS10690 (FE005_10690) - 2285222..2286121 (+) 900 WP_003127040.1 RluA family pseudouridine synthase -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 68812.27 Da        Isoelectric Point: 4.6378

>NTDB_id=364659 FE005_RS10660 WP_113849879.1 2279869..2281686(+) (pepF) [Enterococcus sp. M190262]
MSETKQLPDRADLPEALTWDLTKIYADDGAFEEAFQEIVAELKQADDFKGTLSQGPAAFKEALEYVLAISRKLEKLYVYS
HLKNDQDTANTTYQGLYAKASNLVAQVSEAIAWFDPELLSMDDATIWGYFDQEPELAIYRHLIEKTVNNRSHVLPAEQEA
LLAGAGEIFGASGNIFSVLNNADLEFPIVEDENGEKVQLSHGVYGQLMENTDRSVREAAFKGLYGVYEQFRNTFAQTLST
NIKAHNFKAKARHYESARQAALSANHIPESVYDTLVAVVNEHLPLLHRYMELRKRLLTVDTLHMYDVYTPILGEAPIRYS
YEEAVAKAKDALKPLGEEYLAVVNEAFENRWIDVVENKGKRSGAYSSGAYDTLPYILMNWNDRLDQLFTLVHEMGHSVHS
YFTRNNQPYVYGDYSIFLAEIASTTNENILTEYMLQTETDPRVKAYVLNHFLDGFKGTIFRQTQFAEFEHFMHVEDAKGT
PLTSEFLSDSYGELNAKYYGPSVEKDPEISLEWSRIPHFYYNYYVYQYATGFSAASALAKKILTGEPDALTKYLTYLKAG
NSDYPIEVMKKAGVDMTKADYIKDAMKVFEQRLDELEALVKELEA

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=364659 FE005_RS10660 WP_113849879.1 2279869..2281686(+) (pepF) [Enterococcus sp. M190262]
ATGTCAGAAACAAAACAATTACCAGATCGTGCGGATCTACCGGAAGCATTAACATGGGACCTTACAAAGATCTATGCCGA
TGATGGGGCATTTGAAGAAGCGTTCCAAGAGATCGTGGCTGAGTTGAAGCAGGCTGATGATTTCAAAGGGACATTATCAC
AAGGACCAGCAGCTTTCAAGGAAGCATTAGAATATGTGTTAGCGATCTCCCGTAAACTGGAAAAACTCTATGTATACAGT
CATCTGAAAAATGATCAAGATACAGCCAACACAACCTATCAAGGGCTTTATGCAAAAGCCAGCAACCTTGTTGCTCAAGT
AAGTGAAGCGATTGCCTGGTTTGATCCTGAATTGCTTTCAATGGATGATGCAACTATTTGGGGTTATTTCGACCAAGAGC
CGGAATTGGCCATTTACCGCCATCTTATTGAAAAAACTGTCAATAACCGTTCCCATGTTTTGCCGGCTGAACAAGAAGCT
TTACTAGCAGGTGCAGGAGAAATATTCGGCGCTTCTGGAAATATTTTTTCCGTATTAAACAATGCCGATTTAGAATTTCC
GATCGTTGAAGACGAGAATGGAGAGAAAGTTCAATTATCTCATGGTGTTTATGGTCAATTGATGGAAAATACCGACCGTT
CCGTACGGGAAGCTGCCTTTAAAGGGTTGTATGGTGTCTATGAGCAGTTCCGTAATACATTTGCCCAAACATTAAGTACC
AATATCAAAGCCCATAACTTTAAAGCTAAAGCACGCCACTATGAGTCTGCTCGACAAGCTGCATTAAGTGCCAACCACAT
CCCGGAAAGTGTCTATGACACCTTGGTAGCTGTCGTGAATGAACATTTGCCGCTGCTGCATCGTTACATGGAGTTAAGAA
AACGCTTATTGACTGTTGATACTTTGCATATGTATGATGTCTATACACCAATTCTAGGGGAAGCTCCGATTCGCTATAGC
TATGAAGAAGCTGTCGCAAAAGCCAAAGATGCTTTAAAACCTCTAGGTGAAGAATATTTAGCCGTGGTAAACGAAGCGTT
TGAAAATCGCTGGATCGATGTTGTCGAAAATAAAGGCAAACGCAGTGGCGCCTATTCATCTGGCGCGTACGACACATTAC
CCTATATTTTGATGAACTGGAATGATCGTTTGGATCAATTGTTCACATTGGTGCATGAGATGGGTCACAGTGTCCACAGT
TATTTTACTCGCAACAATCAACCTTATGTTTATGGCGATTATTCCATTTTCTTGGCGGAAATTGCTTCAACAACTAACGA
GAACATCTTGACAGAATACATGTTGCAAACTGAAACTGATCCTCGCGTAAAAGCCTATGTCTTGAATCATTTTCTGGATG
GATTTAAAGGAACGATTTTCCGTCAGACACAATTTGCTGAGTTTGAACACTTTATGCACGTAGAAGATGCCAAAGGAACG
CCATTGACTAGTGAATTTTTGAGTGACAGCTATGGTGAGCTGAATGCTAAATACTACGGTCCTTCTGTAGAAAAAGATCC
TGAGATCAGTCTAGAGTGGTCACGTATCCCGCATTTTTACTACAATTACTATGTCTATCAATACGCAACAGGCTTTTCGG
CAGCTTCTGCACTAGCTAAGAAAATTTTAACAGGAGAGCCTGATGCCTTAACGAAATATTTGACCTATCTAAAAGCAGGC
AACAGCGATTATCCAATTGAAGTGATGAAAAAAGCTGGAGTTGATATGACTAAAGCAGATTATATCAAAGACGCGATGAA
AGTCTTTGAACAACGGTTGGATGAATTGGAAGCATTAGTCAAGGAATTAGAAGCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(117-186)

Peptidase family M3 (Peptidase_M3)

(207-587)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

56.397

98.182

0.554

Multiple sequence alignment