Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FED51_RS14705 Genome accession   NZ_CP040441
Coordinates   3017973..3018152 (-) Length   59 a.a.
NCBI ID   WP_041821709.1    Uniprot ID   A0A0M0KMW0
Organism   Halalkalibacterium halodurans isolate LB-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3012973..3023152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FED51_RS14675 fabF 3013440..3014675 (-) 1236 WP_053430671.1 beta-ketoacyl-ACP synthase II -
  FED51_RS14680 - 3014713..3015651 (-) 939 WP_053430670.1 beta-ketoacyl-ACP synthase III -
  FED51_RS14685 - 3015874..3016173 (+) 300 WP_010899031.1 hypothetical protein -
  FED51_RS14690 - 3016269..3016523 (-) 255 WP_053430669.1 hypothetical protein -
  FED51_RS14695 - 3016592..3016921 (-) 330 WP_010899033.1 hypothetical protein -
  FED51_RS14700 - 3017002..3017787 (-) 786 WP_138090651.1 class I SAM-dependent methyltransferase -
  FED51_RS14705 comZ 3017973..3018152 (-) 180 WP_041821709.1 ComZ family protein Regulator
  FED51_RS14710 - 3018245..3019195 (-) 951 WP_053430668.1 BMP family ABC transporter substrate-binding protein -
  FED51_RS21180 - 3019379..3019552 (-) 174 WP_166740048.1 hypothetical protein -
  FED51_RS14715 - 3019598..3020503 (-) 906 WP_053430667.1 NAD-dependent epimerase/dehydratase family protein -
  FED51_RS14720 - 3020535..3021281 (-) 747 WP_053430666.1 alpha/beta hydrolase family protein -
  FED51_RS14725 - 3021838..3022017 (-) 180 WP_053430665.1 YjzC family protein -
  FED51_RS14730 argF 3022070..3023029 (-) 960 WP_053430664.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6848.86 Da        Isoelectric Point: 3.8598

>NTDB_id=364490 FED51_RS14705 WP_041821709.1 3017973..3018152(-) (comZ) [Halalkalibacterium halodurans isolate LB-1]
MQFMQIAMKHLPEGKAFLDEKGIELSMEEMQPMLQLLMNVMNEAYELGWEDAQQSQNDG

Nucleotide


Download         Length: 180 bp        

>NTDB_id=364490 FED51_RS14705 WP_041821709.1 3017973..3018152(-) (comZ) [Halalkalibacterium halodurans isolate LB-1]
ATGCAATTCATGCAAATTGCGATGAAGCATCTTCCGGAGGGAAAAGCGTTTCTCGACGAAAAAGGAATTGAGCTATCGAT
GGAAGAGATGCAGCCAATGCTGCAACTTTTAATGAACGTTATGAATGAAGCCTATGAGTTAGGCTGGGAAGACGCACAGC
AAAGCCAAAATGATGGATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M0KMW0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.491

89.831

0.525

Multiple sequence alignment