Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FEO88_RS17780 Genome accession   NZ_CP040439
Coordinates   3808057..3808458 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain PEG-141     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3803057..3813458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FEO88_RS17765 (FEO88_17920) - 3805068..3807104 (-) 2037 WP_032130100.1 methyl-accepting chemotaxis protein -
  FEO88_RS17770 (FEO88_17925) - 3807146..3807676 (-) 531 WP_005410716.1 chemotaxis protein CheW -
  FEO88_RS17775 (FEO88_17930) - 3807676..3808038 (-) 363 WP_005410717.1 response regulator -
  FEO88_RS17780 (FEO88_17935) pilG 3808057..3808458 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  FEO88_RS17785 (FEO88_17940) gshB 3808699..3809646 (+) 948 WP_154264214.1 glutathione synthase -
  FEO88_RS17790 (FEO88_17945) - 3809646..3810530 (+) 885 WP_106468887.1 energy transducer TonB -
  FEO88_RS17795 (FEO88_17950) tsaB 3811198..3811911 (-) 714 WP_154353200.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=364439 FEO88_RS17780 WP_005418455.1 3808057..3808458(-) (pilG) [Stenotrophomonas maltophilia strain PEG-141]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=364439 FEO88_RS17780 WP_005418455.1 3808057..3808458(-) (pilG) [Stenotrophomonas maltophilia strain PEG-141]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTGTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAATACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment