Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FEO94_RS16255 Genome accession   NZ_CP040433
Coordinates   3528933..3529334 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain SKK55     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3523933..3534334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FEO94_RS16240 (FEO94_16390) - 3525945..3527981 (-) 2037 WP_049415562.1 methyl-accepting chemotaxis protein -
  FEO94_RS16245 (FEO94_16395) - 3528023..3528553 (-) 531 WP_005418454.1 chemotaxis protein CheW -
  FEO94_RS16250 (FEO94_16400) - 3528553..3528915 (-) 363 WP_005410717.1 response regulator -
  FEO94_RS16255 (FEO94_16405) pilG 3528933..3529334 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  FEO94_RS16260 (FEO94_16410) gshB 3529575..3530522 (+) 948 WP_154351259.1 glutathione synthase -
  FEO94_RS16265 (FEO94_16415) - 3530522..3531406 (+) 885 WP_061478900.1 energy transducer TonB -
  FEO94_RS16270 (FEO94_16420) tsaB 3531959..3532672 (-) 714 WP_154351260.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=364400 FEO94_RS16255 WP_005418455.1 3528933..3529334(-) (pilG) [Stenotrophomonas maltophilia strain SKK55]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=364400 FEO94_RS16255 WP_005418455.1 3528933..3529334(-) (pilG) [Stenotrophomonas maltophilia strain SKK55]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCCAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTGTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment