Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FEO95_RS17725 Genome accession   NZ_CP040432
Coordinates   3843180..3843581 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain sm-RA9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3838180..3848581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FEO95_RS17710 (FEO95_17810) - 3840191..3842227 (-) 2037 WP_006385328.1 methyl-accepting chemotaxis protein -
  FEO95_RS17715 (FEO95_17815) - 3842269..3842799 (-) 531 WP_006385330.1 chemotaxis protein CheW -
  FEO95_RS17720 (FEO95_17820) - 3842799..3843161 (-) 363 WP_006385332.1 response regulator -
  FEO95_RS17725 (FEO95_17825) pilG 3843180..3843581 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  FEO95_RS17730 (FEO95_17830) gshB 3843822..3844769 (+) 948 WP_006385338.1 glutathione synthase -
  FEO95_RS17735 (FEO95_17835) - 3844769..3845653 (+) 885 WP_012511877.1 energy transducer TonB -
  FEO95_RS17740 (FEO95_17840) tsaB 3846055..3846768 (-) 714 WP_006385405.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=364380 FEO95_RS17725 WP_005418455.1 3843180..3843581(-) (pilG) [Stenotrophomonas maltophilia strain sm-RA9]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=364380 FEO95_RS17725 WP_005418455.1 3843180..3843581(-) (pilG) [Stenotrophomonas maltophilia strain sm-RA9]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment