Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FEO85_RS16605 Genome accession   NZ_CP040431
Coordinates   3561659..3562060 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain sm454     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3556659..3567060
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FEO85_RS16590 (FEO85_16750) - 3558670..3560706 (-) 2037 WP_005410715.1 methyl-accepting chemotaxis protein -
  FEO85_RS16595 (FEO85_16755) - 3560748..3561278 (-) 531 WP_005410716.1 chemotaxis protein CheW -
  FEO85_RS16600 (FEO85_16760) - 3561278..3561640 (-) 363 WP_005410717.1 response regulator -
  FEO85_RS16605 (FEO85_16765) pilG 3561659..3562060 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  FEO85_RS16610 (FEO85_16770) gshB 3562301..3563248 (+) 948 WP_005410718.1 glutathione synthase -
  FEO85_RS16615 (FEO85_16775) - 3563248..3564132 (+) 885 WP_005410719.1 energy transducer TonB -
  FEO85_RS16620 (FEO85_16780) tsaB 3564638..3565351 (-) 714 WP_076739940.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=364359 FEO85_RS16605 WP_005418455.1 3561659..3562060(-) (pilG) [Stenotrophomonas maltophilia strain sm454]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=364359 FEO85_RS16605 WP_005418455.1 3561659..3562060(-) (pilG) [Stenotrophomonas maltophilia strain sm454]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCTTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment