Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   E3T09_RS03390 Genome accession   NZ_CP047813
Coordinates   681957..682580 (+) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain UP_1500     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 676957..687580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3T09_RS03360 (E3T09_03360) - 677932..678399 (-) 468 WP_000966142.1 CcdC family protein -
  E3T09_RS03365 (E3T09_03365) - 678493..678591 (-) 99 WP_001789897.1 hypothetical protein -
  E3T09_RS03370 (E3T09_03370) - 678578..678820 (-) 243 WP_000246909.1 YneF family protein -
  E3T09_RS03375 (E3T09_03375) recP/tkt 679098..681086 (-) 1989 WP_000481451.1 transketolase Machinery gene
  E3T09_RS03380 (E3T09_03380) - 681207..681445 (-) 239 Protein_635 DUF896 domain-containing protein -
  E3T09_RS03385 (E3T09_03385) sosA 681581..681814 (-) 234 WP_000499647.1 DNA damage-induced cell division inhibitor SosA -
  E3T09_RS03390 (E3T09_03390) dinR/lexA 681957..682580 (+) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  E3T09_RS03395 (E3T09_03395) - 682960..683976 (-) 1017 WP_170957313.1 CAP domain-containing protein -
  E3T09_RS03405 (E3T09_03405) guaC 683998..684975 (-) 978 WP_000688121.1 GMP reductase -
  E3T09_RS03410 (E3T09_03410) rpsN 685132..685401 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  E3T09_RS03415 (E3T09_03415) rpmG 685855..686004 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=363892 E3T09_RS03390 WP_001208755.1 681957..682580(+) (dinR/lexA) [Staphylococcus aureus strain UP_1500]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=363892 E3T09_RS03390 WP_001208755.1 681957..682580(+) (dinR/lexA) [Staphylococcus aureus strain UP_1500]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCGACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657