Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FED53_RS17275 Genome accession   NZ_CP040367
Coordinates   3249179..3249373 (-) Length   64 a.a.
NCBI ID   WP_025908161.1    Uniprot ID   A0A0V8JM81
Organism   Priestia flexa isolate 1-2-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3244179..3254373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FED53_RS17250 (FED53_17250) - 3244575..3245324 (-) 750 WP_025908156.1 YjbA family protein -
  FED53_RS17255 (FED53_17255) - 3245521..3246291 (-) 771 WP_062686723.1 DUF2268 domain-containing protein -
  FED53_RS17260 (FED53_17260) fabF 3246478..3247719 (-) 1242 WP_061785439.1 beta-ketoacyl-ACP synthase II -
  FED53_RS17265 (FED53_17265) - 3247754..3248692 (-) 939 WP_025908159.1 beta-ketoacyl-ACP synthase III -
  FED53_RS17270 (FED53_17270) - 3248970..3249161 (+) 192 WP_025908160.1 hypothetical protein -
  FED53_RS17275 (FED53_17275) comZ 3249179..3249373 (-) 195 WP_025908161.1 ComZ family protein Regulator
  FED53_RS17280 (FED53_17280) - 3249486..3250361 (-) 876 WP_025908162.1 NAD-dependent epimerase/dehydratase family protein -
  FED53_RS17285 (FED53_17285) - 3250427..3251164 (-) 738 WP_061785438.1 alpha/beta hydrolase -
  FED53_RS17290 (FED53_17290) - 3251411..3251599 (+) 189 WP_025908164.1 YjzD family protein -
  FED53_RS17295 (FED53_17295) - 3251631..3253625 (-) 1995 WP_138117359.1 beta-galactosidase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7415.62 Da        Isoelectric Point: 4.2259

>NTDB_id=363712 FED53_RS17275 WP_025908161.1 3249179..3249373(-) (comZ) [Priestia flexa isolate 1-2-1]
MMEQQMQFMQIAMKYLPEAKEILDQTGVELSMEHVQPVLGLLTKVMNDAYELGKEDALKEQNEK

Nucleotide


Download         Length: 195 bp        

>NTDB_id=363712 FED53_RS17275 WP_025908161.1 3249179..3249373(-) (comZ) [Priestia flexa isolate 1-2-1]
ATGATGGAACAACAAATGCAGTTTATGCAAATCGCAATGAAGTATTTACCAGAAGCAAAAGAGATTTTAGATCAAACAGG
CGTAGAGCTTTCTATGGAGCACGTTCAGCCAGTTTTAGGGCTTTTAACAAAAGTAATGAATGATGCTTATGAACTTGGTA
AAGAAGATGCGTTAAAAGAGCAGAATGAAAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0V8JM81

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

62.069

90.625

0.563

Multiple sequence alignment