Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | FED53_RS13900 | Genome accession | NZ_CP040367 |
| Coordinates | 2562483..2563433 (-) | Length | 316 a.a. |
| NCBI ID | WP_061785366.1 | Uniprot ID | A0A1N6XFR8 |
| Organism | Priestia flexa isolate 1-2-1 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2557483..2568433
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FED53_RS13875 (FED53_13875) | - | 2558751..2559221 (-) | 471 | WP_138117175.1 | GNAT family N-acetyltransferase | - |
| FED53_RS13880 (FED53_13880) | - | 2559382..2559657 (+) | 276 | WP_025907150.1 | DUF4282 domain-containing protein | - |
| FED53_RS13885 (FED53_13885) | - | 2559694..2560647 (-) | 954 | WP_138117176.1 | siderophore ABC transporter substrate-binding protein | - |
| FED53_RS13890 (FED53_13890) | - | 2560782..2561543 (-) | 762 | WP_025907148.1 | ABC transporter ATP-binding protein | - |
| FED53_RS13895 (FED53_13895) | - | 2561540..2562490 (-) | 951 | WP_138117177.1 | iron chelate uptake ABC transporter family permease subunit | - |
| FED53_RS13900 (FED53_13900) | ceuB | 2562483..2563433 (-) | 951 | WP_061785366.1 | ABC transporter permease | Machinery gene |
| FED53_RS13905 (FED53_13905) | - | 2563693..2564133 (-) | 441 | WP_138117178.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| FED53_RS13910 (FED53_13910) | - | 2564269..2564562 (+) | 294 | WP_025907140.1 | putative quinol monooxygenase | - |
| FED53_RS13915 (FED53_13915) | - | 2564688..2564990 (+) | 303 | WP_138117179.1 | DUF6509 family protein | - |
| FED53_RS13925 (FED53_13925) | - | 2565507..2566409 (+) | 903 | WP_076513268.1 | AEC family transporter | - |
| FED53_RS13930 (FED53_13930) | - | 2566740..2567354 (-) | 615 | WP_025907132.1 | acetate uptake transporter | - |
| FED53_RS13935 (FED53_13935) | - | 2567473..2567676 (-) | 204 | WP_025907130.1 | cold-shock protein | - |
| FED53_RS20930 | - | 2568015..2568185 (-) | 171 | WP_167556154.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 34674.97 Da Isoelectric Point: 9.5404
>NTDB_id=363703 FED53_RS13900 WP_061785366.1 2562483..2563433(-) (ceuB) [Priestia flexa isolate 1-2-1]
MKIRYLIILLFLLSLISLFIGVSPVNIYGVLSFDQEQIQVLLISRFPRLISIIIAGVSLSICGLIMQQLTRNKFVSPTTA
GTMDSARLGVLVALMLFTSASPIQKMLVAFVFALIGTFIFMKILDSIKVKDRIFIPLVGLMFGNVIGSITTFFAYKNDLI
QSIGSWLQGDFSTIISGQYELIYLSVPLMIIAYLYANKFTIAGMGEDFATNLGLPFKQVVNIGLVIVALVSSIVLLTVGM
IPFLGLIIPNIVSIYAGDHLKNSLPQTALLGAVFVLTCDILGRVIIYPYEISIGMMVGVIGSGIFLYMLIRRKAYE
MKIRYLIILLFLLSLISLFIGVSPVNIYGVLSFDQEQIQVLLISRFPRLISIIIAGVSLSICGLIMQQLTRNKFVSPTTA
GTMDSARLGVLVALMLFTSASPIQKMLVAFVFALIGTFIFMKILDSIKVKDRIFIPLVGLMFGNVIGSITTFFAYKNDLI
QSIGSWLQGDFSTIISGQYELIYLSVPLMIIAYLYANKFTIAGMGEDFATNLGLPFKQVVNIGLVIVALVSSIVLLTVGM
IPFLGLIIPNIVSIYAGDHLKNSLPQTALLGAVFVLTCDILGRVIIYPYEISIGMMVGVIGSGIFLYMLIRRKAYE
Nucleotide
Download Length: 951 bp
>NTDB_id=363703 FED53_RS13900 WP_061785366.1 2562483..2563433(-) (ceuB) [Priestia flexa isolate 1-2-1]
GTGAAAATTAGGTATCTTATTATTTTACTATTTTTATTATCGCTTATTTCGTTATTTATCGGCGTATCACCAGTAAATAT
TTATGGGGTCTTATCCTTTGATCAAGAGCAAATTCAAGTGCTACTAATTAGTCGTTTTCCACGATTGATTAGCATCATTA
TTGCTGGAGTAAGCTTAAGTATATGTGGATTGATTATGCAGCAGCTGACGAGAAATAAATTTGTTTCTCCGACGACCGCT
GGAACCATGGATTCTGCACGCTTAGGTGTTTTGGTAGCATTGATGTTATTCACATCAGCTAGTCCAATTCAAAAAATGTT
GGTTGCATTTGTTTTCGCTTTAATTGGAACCTTCATTTTTATGAAGATTTTAGATTCTATCAAAGTGAAAGATCGAATTT
TTATTCCTCTTGTTGGTTTGATGTTTGGTAATGTCATTGGTTCCATAACGACATTTTTTGCTTATAAAAATGATTTGATT
CAAAGCATTGGCTCTTGGTTGCAAGGTGATTTCTCTACCATTATTTCAGGACAATATGAGTTAATCTATTTAAGTGTTCC
ACTGATGATTATTGCCTACTTGTATGCTAATAAATTTACGATTGCAGGAATGGGAGAGGACTTTGCTACCAATCTAGGGT
TACCATTTAAGCAGGTTGTGAACATTGGGTTAGTCATCGTAGCACTTGTGTCATCTATCGTACTATTAACGGTTGGAATG
ATTCCTTTTTTAGGATTAATCATTCCGAATATTGTGTCAATATATGCTGGAGATCATTTGAAAAACAGTCTTCCGCAAAC
AGCTTTGCTTGGAGCGGTTTTTGTACTGACTTGTGATATTTTAGGACGAGTTATCATTTATCCATACGAGATTTCCATTG
GTATGATGGTTGGCGTCATTGGTAGTGGGATATTCTTGTACATGTTGATTAGGAGAAAGGCTTATGAGTAA
GTGAAAATTAGGTATCTTATTATTTTACTATTTTTATTATCGCTTATTTCGTTATTTATCGGCGTATCACCAGTAAATAT
TTATGGGGTCTTATCCTTTGATCAAGAGCAAATTCAAGTGCTACTAATTAGTCGTTTTCCACGATTGATTAGCATCATTA
TTGCTGGAGTAAGCTTAAGTATATGTGGATTGATTATGCAGCAGCTGACGAGAAATAAATTTGTTTCTCCGACGACCGCT
GGAACCATGGATTCTGCACGCTTAGGTGTTTTGGTAGCATTGATGTTATTCACATCAGCTAGTCCAATTCAAAAAATGTT
GGTTGCATTTGTTTTCGCTTTAATTGGAACCTTCATTTTTATGAAGATTTTAGATTCTATCAAAGTGAAAGATCGAATTT
TTATTCCTCTTGTTGGTTTGATGTTTGGTAATGTCATTGGTTCCATAACGACATTTTTTGCTTATAAAAATGATTTGATT
CAAAGCATTGGCTCTTGGTTGCAAGGTGATTTCTCTACCATTATTTCAGGACAATATGAGTTAATCTATTTAAGTGTTCC
ACTGATGATTATTGCCTACTTGTATGCTAATAAATTTACGATTGCAGGAATGGGAGAGGACTTTGCTACCAATCTAGGGT
TACCATTTAAGCAGGTTGTGAACATTGGGTTAGTCATCGTAGCACTTGTGTCATCTATCGTACTATTAACGGTTGGAATG
ATTCCTTTTTTAGGATTAATCATTCCGAATATTGTGTCAATATATGCTGGAGATCATTTGAAAAACAGTCTTCCGCAAAC
AGCTTTGCTTGGAGCGGTTTTTGTACTGACTTGTGATATTTTAGGACGAGTTATCATTTATCCATACGAGATTTCCATTG
GTATGATGGTTGGCGTCATTGGTAGTGGGATATTCTTGTACATGTTGATTAGGAGAAAGGCTTATGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
52.215 |
100 |
0.522 |