Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   E3T15_RS09420 Genome accession   NZ_CP047807
Coordinates   1910997..1911797 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain UP_1612     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1905997..1916797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3T15_RS09400 (E3T15_09400) - 1907210..1907302 (-) 93 WP_001790000.1 hypothetical protein -
  E3T15_RS09405 (E3T15_09405) - 1907266..1907400 (+) 135 WP_001790628.1 hypothetical protein -
  E3T15_RS09410 (E3T15_09410) rlmH 1907605..1908084 (-) 480 WP_021286021.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E3T15_RS09415 (E3T15_09415) adsA 1908452..1910770 (-) 2319 WP_000645770.1 LPXTG-anchored adenosine synthase AdsA -
  E3T15_RS09420 (E3T15_09420) vicX 1910997..1911797 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  E3T15_RS09425 (E3T15_09425) - 1912193..1912981 (-) 789 WP_001104166.1 two-component system regulatory protein YycI -
  E3T15_RS09430 (E3T15_09430) yycH 1912982..1914316 (-) 1335 WP_061743967.1 two-component system activity regulator YycH -
  E3T15_RS09435 (E3T15_09435) walK 1914309..1916135 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=363665 E3T15_RS09420 WP_000088649.1 1910997..1911797(-) (vicX) [Staphylococcus aureus strain UP_1612]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=363665 E3T15_RS09420 WP_000088649.1 1910997..1911797(-) (vicX) [Staphylococcus aureus strain UP_1612]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGACATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474