Detailed information NTG0036365

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LLO_RS01920
• Genome accession: NC_013861
• Coordinates: 416714..417766 (+)
• Length: 350 a.a.
• NCBI ID: WP_003633239.1
• Uniprot ID: D3HP88
• Organism: Legionella longbeachae NSW150
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 411714..422766

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLO_RS01895 (llo0368)	-	411920..412846 (-)	927	WP_003633245.1	type IV secretion system DotC family protein	-
LLO_RS01900 (llo0369)	dotD	412827..413318 (-)	492	WP_003633244.1	type IVB secretion system lipoprotein DotD	-
LLO_RS01905 (llo0370)	rsmD	413487..414032 (-)	546	WP_003633243.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LLO_RS01910 (llo0371)	-	414029..415333 (-)	1305	WP_003633242.1	M16 family metallopeptidase	-
LLO_RS01915 (llo0372)	-	415330..416625 (-)	1296	WP_396426634.1	M16 family metallopeptidase	-
LLO_RS01920 (llo0373)	pilA	416714..417766 (+)	1053	WP_003633239.1	signal recognition particle-docking protein FtsY	Machinery gene
LLO_RS01925 (llo0374)	ftsE	417753..418403 (+)	651	WP_003633237.1	cell division ATP-binding protein FtsE	-
LLO_RS01930 (llo0375)	ftsX	418397..419326 (+)	930	WP_003633236.1	permease-like cell division protein FtsX	-
LLO_RS01935 (llo0376)	rpoH	419373..420227 (+)	855	WP_003633234.1	RNA polymerase sigma factor RpoH	-
LLO_RS01940 (llo0377)	-	420366..421244 (-)	879	WP_003633233.1	alpha/beta hydrolase	-
LLO_RS01945 (llo0378)	-	421498..422214 (+)	717	WP_003633231.1	dienelactone hydrolase family protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38240.87 Da
• Isoelectric Point: 6.5102

>NTDB_id=36365 LLO_RS01920 WP_003633239.1 416714..417766(+) (pilA) [Legionella longbeachae NSW150]
MIKWFKRSHTPTSSEADESQHKEELMPQAPMTKAEQEQEPVKEGFFARFRKSLSKTRHQLGDGIGRLLLGKKEISQELLD
ELETLLISADLGIETTQAVLNQLTEGLARKQLSDGNAVYEALKSYLQGILKQKNQSLTLETADHSPFVILMVGVNGAGKT
TTIGKLAKQFQQQGKKVMLAAGDTFRAAAVEQLLVWGERNDIPVIAQHTGADSASVIFDALQAAKARKMDVLIADTAGRL
HTQSNLMEELKKVKRVLQKLSPDAPHETMLILDASIGQNALVQARQFNEAIGLTGVTMTKLDGTAKGGILFAIANELGIP
FRYIGIGEGIEDLQPFDAAQFVGALFNDHI

Nucleotide

• Length: 1053 bp

>NTDB_id=36365 LLO_RS01920 WP_003633239.1 416714..417766(+) (pilA) [Legionella longbeachae NSW150]
ATGATTAAATGGTTCAAACGCAGTCACACGCCAACTTCTTCAGAAGCAGATGAGTCCCAGCATAAAGAAGAGTTAATGCC
GCAAGCTCCTATGACGAAGGCGGAACAAGAGCAAGAGCCTGTAAAAGAAGGATTTTTTGCGCGTTTTAGGAAAAGTTTAA
GTAAAACGCGTCATCAGTTAGGTGATGGTATTGGCCGGTTATTGTTAGGGAAAAAAGAAATCAGTCAAGAGTTGCTGGAT
GAGTTAGAAACTCTTTTAATCAGTGCTGATTTAGGGATAGAAACCACACAAGCGGTATTAAATCAATTGACAGAAGGTTT
AGCACGTAAGCAATTGTCTGACGGTAATGCTGTTTATGAGGCACTTAAATCGTATTTACAAGGGATTTTAAAGCAAAAAA
ATCAATCGTTGACTTTAGAAACCGCAGATCATTCCCCTTTTGTCATTTTAATGGTTGGCGTGAATGGAGCTGGTAAAACA
ACCACTATTGGTAAATTAGCAAAGCAATTTCAACAGCAGGGTAAAAAAGTGATGTTAGCTGCTGGAGATACTTTTAGAGC
TGCAGCGGTAGAACAGTTGCTTGTTTGGGGGGAGCGAAATGATATTCCCGTTATTGCCCAACATACAGGAGCTGATAGTG
CATCCGTTATTTTTGATGCTCTTCAGGCAGCTAAAGCACGAAAAATGGATGTATTAATTGCGGATACGGCGGGACGCTTA
CATACCCAAAGCAATTTAATGGAAGAATTGAAAAAAGTAAAAAGGGTATTACAAAAACTATCTCCTGATGCGCCTCATGA
AACAATGTTGATATTGGATGCATCTATAGGGCAAAATGCATTAGTTCAAGCAAGGCAATTCAATGAAGCGATTGGATTAA
CGGGTGTTACCATGACTAAACTGGATGGGACAGCTAAAGGCGGTATTTTGTTTGCTATTGCTAATGAACTAGGGATACCC
TTTCGTTATATAGGGATTGGTGAGGGAATAGAGGATCTTCAACCCTTTGATGCTGCGCAATTTGTTGGTGCATTATTTAA
TGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (60-124)

• SRP54-type protein, GTPase domain (SRP54) (146-346)

3D structure

• AlphaFold DB: D3HP88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	55.375	87.714	0.486