Detailed information NTG0363518

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: EQO03_RS14265
• Genome accession: NZ_CP040344
• Coordinates: 2752933..2755533 (+)
• Length: 866 a.a.
• NCBI ID: WP_048526691.1
• Uniprot ID: -
• Organism: Bacillus albus strain DLOU-Yingkou
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2747933..2760533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQO03_RS14230	prsA	2748696..2749553 (-)	858	WP_157409465.1	peptidylprolyl isomerase PrsA	-
EQO03_RS14235	-	2749683..2749814 (-)	132	WP_001120847.1	DUF3941 domain-containing protein	-
EQO03_RS14240	-	2749915..2750772 (+)	858	WP_071758300.1	YitT family protein	-
EQO03_RS14245	-	2750798..2750995 (-)	198	WP_000527393.1	DUF3813 domain-containing protein	-
EQO03_RS14250	-	2750996..2751136 (-)	141	WP_000516816.1	hypothetical protein	-
EQO03_RS14255	-	2751242..2752051 (-)	810	WP_001041237.1	Cof-type HAD-IIB family hydrolase	-
EQO03_RS14260	-	2752543..2752722 (+)	180	WP_000531421.1	YjzC family protein	-
EQO03_RS14265	clpC	2752933..2755533 (+)	2601	WP_048526691.1	ATP-dependent chaperone ClpB	Regulator
EQO03_RS14270	-	2755568..2755750 (-)	183	WP_001211116.1	YjzD family protein	-
EQO03_RS14275	-	2755907..2756641 (+)	735	WP_048526692.1	hydrolase	-
EQO03_RS14280	-	2756671..2757543 (+)	873	WP_157409466.1	NAD(P)-dependent oxidoreductase	-
EQO03_RS14285	comZ	2757597..2757773 (+)	177	WP_048527481.1	ComZ family protein	Regulator
EQO03_RS14290	fabH	2758017..2758949 (+)	933	WP_157409467.1	beta-ketoacyl-ACP synthase III	-
EQO03_RS14295	fabF	2758981..2760219 (+)	1239	WP_000412652.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97485.53 Da
• Isoelectric Point: 5.1572

>NTDB_id=363518 EQO03_RS14265 WP_048526691.1 2752933..2755533(+) (clpC) [Bacillus albus strain DLOU-Yingkou]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
AGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTIMDSSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=363518 EQO03_RS14265 WP_048526691.1 2752933..2755533(+) (clpC) [Bacillus albus strain DLOU-Yingkou]
ATGGACTTAAATCAAATGACAACGAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTGTCTCATCATCATCA
AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTACGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAACAAGGTGCTGAAAGTTTAATTAAGAAAAAGCCCTCTGTAACGGGAAGCGGTGCAGAA
GCAGGTAAATTATATATAACAGGTGCTCTGCAACAACTACTTGTAAGAGCGGGAAAAGAAGCAGAAAAATTGCAAGATGA
CTACATTTCAGTCGAGCATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATCAATCAATTATTCACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTGGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATCGGCCGCGA
TAGTGAAATTCGCCGTGTAATCCGCATTCTTTCACGTAAAACGAAAAACAACCCGGTTTTAATTGGTGAGCCAGGTGTTG
GTAAAACAGCGATCGTTGAAGGATTAGCACAGCGTATTGTGAAGAAGGATGTGCCTGAAGGATTAAAAGATAGAACAATC
TTTGCATTAGATATGAGTGCGCTCGTAGCTGGAGCGAAATTCCGTGGTGAATTTGAAGAGCGTCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGCCGCATTTTATTATTCATTGATGAACTTCATACAATCGTCGGCGCTGGTAAAACAGAAG
GTGCGATGGACGCAGGAAATATGTTAAAACCGATGCTTGCTCGCGGTGAACTGCATTGTATCGGAGCGACGACGCTCGAT
GAATATCGTAAATATATTGAGAAAGATCCAGCGTTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGTTTTGAAATTTATCACGGTGTAAATATTCATGACCGCGCGATTG
TAGCAGCATCTGTTTTATCAGATCGATATATTTCGGATCGTTTCTTACCAGATAAAGCAATTGATCTTGTTGACGAAGCG
TGTGCAACGATTCGAACAGAGATTGATTCTATGCCAACAGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAAAT
TGAAGAAGCAGCTCTTGGAAAAGAGAAGGACTTCGGTAGCCAAGAACGTCTAAAAACGTTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGGAATTACGATTTAAATAAAGCAGCGGAACTTCGCCACGG
AAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCACATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCAAAACTCGTTGAAGGT
GAACGTGAGAAATTACTACGCTTAGAGCAAATTTTATCAGAACGTGTCATCGGACAAGAGGAAGCGGTAAGCTTAGTATC
AGACGCAGTTCTTCGTGCGCGCGCTGGTATTAAAGACCCGAACCGTCCGATTGGTTCCTTCATTTTCTTAGGACCGACTG
GTGTTGGTAAAACAGAACTTGCAAAAACTTTAGCGCAGTCTCTATTCGATAGTGAAGAGCAAATGATCCGTATCGATATG
TCTGAGTATATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCGCCTCCTGGATATGTTGGATATGAAGAGGGCGGTCA
ATTAACAGAAGCAGTAAGACGTAAACCGTATTCCGTTATTTTATTAGACGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGACGGACGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACAGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTATTAGATGGATTAGAAGAAGATGGCTCCATTAAAGAAGAATCAAGAGA
ACTTGTGATGGGACAATTAAGAGGACATTTCCGACCAGAGTTTTTAAACCGTGTCGACGAAATTATTTTATTCAAACCTC
TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGTCGTTTAGCTGACCGTCATATTACA
GTAGAATTAACAGACGCAGCGAAAGAATTTGTTGTAGAAGCTGGCTTTGATCCGATGTACGGAGCTCGTCCATTAAAACG
ATATGTACAGCGTCAAGTTGAGACGAAATTAGCGAGAGAATTAATTGCAGGTACGATTATGGACAGTAGTCATGTAGTAG
TTGATGTAGAAAATAACGAATTAGTCGTGCATGTGAAATAA

Domains

Predicted by InterproScan.

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• AAA lid domain (AAA_lid_9) (345-447)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.657	100	0.482
clpC	Lactococcus lactis subsp. cremoris KW2	47.914	80.254	0.385