Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   EQK03_RS26745 Genome accession   NZ_CP040342
Coordinates   5272701..5273384 (-) Length   227 a.a.
NCBI ID   WP_000350713.1    Uniprot ID   A0A9W5RA28
Organism   Bacillus cereus strain DLOU-Weihai     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 5267701..5278384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQK03_RS26730 pepF 5267881..5269707 (-) 1827 WP_000003348.1 oligoendopeptidase F Regulator
  EQK03_RS26735 - 5269759..5271003 (-) 1245 WP_049108560.1 competence protein CoiA family protein -
  EQK03_RS26740 - 5271084..5272628 (-) 1545 WP_000799194.1 cardiolipin synthase -
  EQK03_RS26745 mecA 5272701..5273384 (-) 684 WP_000350713.1 adaptor protein MecA Regulator
  EQK03_RS26750 - 5273730..5274404 (+) 675 WP_000362607.1 TerC family protein -
  EQK03_RS26755 spx 5274454..5274849 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  EQK03_RS26760 - 5275443..5275646 (+) 204 WP_000559972.1 hypothetical protein -
  EQK03_RS26765 - 5275677..5277323 (-) 1647 WP_000728609.1 peptide ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27010.06 Da        Isoelectric Point: 3.9822

>NTDB_id=363479 EQK03_RS26745 WP_000350713.1 5272701..5273384(-) (mecA) [Bacillus cereus strain DLOU-Weihai]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=363479 EQK03_RS26745 WP_000350713.1 5272701..5273384(-) (mecA) [Bacillus cereus strain DLOU-Weihai]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGACCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment