Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | EQK03_RS22325 | Genome accession | NZ_CP040342 |
| Coordinates | 4414565..4414900 (-) | Length | 111 a.a. |
| NCBI ID | WP_000982018.1 | Uniprot ID | A0A9W5VT75 |
| Organism | Bacillus cereus strain DLOU-Weihai | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4409565..4419900
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQK03_RS22305 | - | 4411162..4411938 (-) | 777 | WP_000637459.1 | class I SAM-dependent methyltransferase | - |
| EQK03_RS22310 | - | 4411988..4412422 (-) | 435 | WP_000063706.1 | BrxA/BrxB family bacilliredoxin | - |
| EQK03_RS22315 | - | 4412506..4412889 (-) | 384 | WP_000634884.1 | DCC1-like thiol-disulfide oxidoreductase family protein | - |
| EQK03_RS22320 | - | 4412893..4414020 (-) | 1128 | WP_000692566.1 | virulence factor | - |
| EQK03_RS22325 | ssbA | 4414565..4414900 (-) | 336 | WP_000982018.1 | single-stranded DNA-binding protein | Machinery gene |
| EQK03_RS22330 | - | 4415062..4415316 (-) | 255 | WP_000975137.1 | DUF4318 domain-containing protein | - |
| EQK03_RS22335 | - | 4415422..4416153 (-) | 732 | WP_001260655.1 | Bax inhibitor-1/YccA family protein | - |
| EQK03_RS22340 | - | 4416229..4418124 (-) | 1896 | WP_000783169.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| EQK03_RS22345 | - | 4418121..4418768 (-) | 648 | WP_000165965.1 | HD domain-containing protein | - |
| EQK03_RS22350 | - | 4418878..4419705 (+) | 828 | WP_086412143.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12771.61 Da Isoelectric Point: 9.4344
>NTDB_id=363473 EQK03_RS22325 WP_000982018.1 4414565..4414900(-) (ssbA) [Bacillus cereus strain DLOU-Weihai]
MMNRVVLIGRLTKEPELYYTKQGVAYARICVAVNRGFRNSLGEQQVDFINCVVWRKSAENVTEYCKKGSLVGITGRIQTS
NYDDEQGKRIYRTEVVIESITFLERRREGAS
MMNRVVLIGRLTKEPELYYTKQGVAYARICVAVNRGFRNSLGEQQVDFINCVVWRKSAENVTEYCKKGSLVGITGRIQTS
NYDDEQGKRIYRTEVVIESITFLERRREGAS
Nucleotide
Download Length: 336 bp
>NTDB_id=363473 EQK03_RS22325 WP_000982018.1 4414565..4414900(-) (ssbA) [Bacillus cereus strain DLOU-Weihai]
ATGATGAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCCAGAATTATACTACACAAAACAAGGCGTTGCTTATGC
ACGAATATGTGTTGCGGTGAATAGAGGATTTCGAAATAGTTTAGGTGAACAACAAGTCGATTTTATTAATTGTGTCGTTT
GGCGCAAATCGGCTGAGAATGTAACTGAATATTGTAAGAAGGGATCACTCGTTGGGATTACAGGGCGTATTCAGACTAGT
AATTACGATGATGAACAAGGCAAGAGAATATATAGAACTGAAGTTGTGATTGAGAGTATTACCTTTTTGGAGAGAAGGCG
GGAGGGGGCATCGTAA
ATGATGAATCGAGTTGTATTAATCGGTAGATTGACAAAGGAGCCAGAATTATACTACACAAAACAAGGCGTTGCTTATGC
ACGAATATGTGTTGCGGTGAATAGAGGATTTCGAAATAGTTTAGGTGAACAACAAGTCGATTTTATTAATTGTGTCGTTT
GGCGCAAATCGGCTGAGAATGTAACTGAATATTGTAAGAAGGGATCACTCGTTGGGATTACAGGGCGTATTCAGACTAGT
AATTACGATGATGAACAAGGCAAGAGAATATATAGAACTGAAGTTGTGATTGAGAGTATTACCTTTTTGGAGAGAAGGCG
GGAGGGGGCATCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
95.495 |
0.559 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.66 |
95.495 |
0.532 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
50.893 |
100 |
0.514 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
45.714 |
94.595 |
0.432 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
43.636 |
99.099 |
0.432 |
| ssbA | Streptococcus mutans UA159 |
40 |
99.099 |
0.396 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
40 |
99.099 |
0.396 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
40 |
99.099 |
0.396 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
39.091 |
99.099 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
39.091 |
99.099 |
0.387 |
| ssbB/cilA | Streptococcus mitis SK321 |
39.091 |
99.099 |
0.387 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
39.091 |
99.099 |
0.387 |