Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EQK03_RS13130 Genome accession   NZ_CP040342
Coordinates   2554353..2554811 (-) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus cereus strain DLOU-Weihai     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2549353..2559811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQK03_RS13105 - 2549509..2551050 (-) 1542 WP_000449912.1 MDR family MFS transporter -
  EQK03_RS13110 - 2551463..2551963 (+) 501 WP_000708120.1 hypothetical protein -
  EQK03_RS13115 - 2551995..2552228 (-) 234 WP_000939448.1 SPP1 phage holin family protein -
  EQK03_RS13120 - 2552392..2553045 (+) 654 WP_000680811.1 diguanylate cyclase -
  EQK03_RS13125 - 2553659..2554321 (+) 663 WP_000922498.1 YkyA family protein -
  EQK03_RS13130 kre 2554353..2554811 (-) 459 WP_000804864.1 YkyB family protein Regulator
  EQK03_RS13140 ppx 2554953..2556527 (+) 1575 WP_012593322.1 exopolyphosphatase -
  EQK03_RS13145 - 2556636..2558744 (+) 2109 WP_000421680.1 polyphosphate kinase -
  EQK03_RS13150 - 2558905..2559141 (-) 237 WP_000283738.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=363467 EQK03_RS13130 WP_000804864.1 2554353..2554811(-) (kre) [Bacillus cereus strain DLOU-Weihai]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=363467 EQK03_RS13130 WP_000804864.1 2554353..2554811(-) (kre) [Bacillus cereus strain DLOU-Weihai]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATCGCTGAAA
AAAAAGCAATTAAAGAAGGATTGCATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAGCCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment