Detailed information NTG0363452

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: EQK03_RS07380
• Genome accession: NZ_CP040342
• Coordinates: 1482228..1483577 (+)
• Length: 449 a.a.
• NCBI ID: WP_157418436.1
• Uniprot ID: -
• Organism: Bacillus cereus strain DLOU-Weihai
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1477228..1488577

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQK03_RS07360	-	1478321..1478956 (-)	636	WP_000926672.1	YigZ family protein	-
EQK03_RS07365	-	1479193..1480035 (+)	843	WP_000684725.1	DegV family protein	-
EQK03_RS07370	-	1480208..1480522 (+)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
EQK03_RS07375	-	1480671..1482101 (+)	1431	WP_157418435.1	C40 family peptidase	-
EQK03_RS07380	comFA	1482228..1483577 (+)	1350	WP_157418436.1	ATP-dependent helicase ComFA	Machinery gene
EQK03_RS07385	-	1483577..1484281 (+)	705	WP_157418437.1	ComF family protein	-
EQK03_RS07390	cspC	1484408..1484605 (+)	198	WP_001990088.1	cold shock protein CspC	-
EQK03_RS07395	raiA	1484928..1485470 (+)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
EQK03_RS07400	secA	1485745..1488252 (+)	2508	WP_000579387.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51047.85 Da
• Isoelectric Point: 9.7495

>NTDB_id=363452 EQK03_RS07380 WP_157418436.1 1482228..1483577(+) (comFA) [Bacillus cereus strain DLOU-Weihai]
MLAGKQLLLEELSSDLQRELNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRWLFASFLCKRCSKVCTYCRKCIAMGRVS
ECAVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATAHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNCERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=363452 EQK03_RS07380 WP_157418436.1 1482228..1483577(+) (comFA) [Bacillus cereus strain DLOU-Weihai]
ATGCTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGGAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAACGTAGATCGGTGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAGCGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTAATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GTGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCAGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCGCGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACTGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGAGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (107-254)

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.131	98.441	0.503