Detailed information NTG0363442

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: EQK03_RS05360
• Genome accession: NZ_CP040342
• Coordinates: 1065402..1066778 (-)
• Length: 458 a.a.
• NCBI ID: WP_157418403.1
• Uniprot ID: -
• Organism: Bacillus cereus strain DLOU-Weihai
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1060402..1071778

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQK03_RS05340	ispF	1061764..1062240 (-)	477	WP_000488386.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
EQK03_RS05345	ispD	1062357..1063037 (-)	681	WP_000288283.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
EQK03_RS05350	-	1063054..1064163 (-)	1110	WP_000919677.1	PIN/TRAM domain-containing protein	-
EQK03_RS05355	disA	1064325..1065398 (-)	1074	WP_000392158.1	DNA integrity scanning diadenylate cyclase DisA	-
EQK03_RS05360	radA	1065402..1066778 (-)	1377	WP_157418403.1	DNA repair protein RadA	Machinery gene
EQK03_RS05365	clpC	1066874..1069309 (-)	2436	WP_000971184.1	ATP-dependent protease ATP-binding subunit ClpC	Regulator
EQK03_RS05370	-	1069332..1070395 (-)	1064	Protein_1009	protein arginine kinase	-
EQK03_RS05375	-	1070400..1070948 (-)	549	WP_000128399.1	UvrB/UvrC motif-containing protein	-
EQK03_RS05380	ctsR	1071119..1071580 (-)	462	WP_001244558.1	transcriptional regulator CtsR	-

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 49858.50 Da
• Isoelectric Point: 7.1422

>NTDB_id=363442 EQK03_RS05360 WP_157418403.1 1065402..1066778(-) (radA) [Bacillus cereus strain DLOU-Weihai]
MAKKKTKFTCQECGYQSPKYMGKCPGCGQWNSLVEEMEPVVSSRRLNYANAIQTEVTKPRRLTEVETKSEARIETKFQEF
NRVLGGGIVDGSLVLIGGDPGIGKSTLLLQISSQLADASYDVLYISGEESAKQIKLRADRLHVNGSNLFVVSETDLQRIA
AHIEEMNPAFVVIDSIQTIHLPEVTSAPGSVAQVRECTAELMKLAKTKGIPIFIVGHVTKEGAIAGPRMLEHMVDAVLYF
EGDRHHTYRILRAVKNRFGSTNEMGIFEMKELGLAEVLNPSEIFLEERPVGVAGSTVVASMEGTRPVLVEIQALISPTSF
GNPRRMATGIDHNRVSLIMAVLEKRTGLLLQNQDAYLKVAGGLKLDEPAIDLAIALSIASSFRDKSTAPTDAVIGEVGLT
GEIRRVSRIEQRVQEAAKLGFQRAIIPRKNLGGWTIPEGIEVVGVSNLGEALRLTLGG

Nucleotide

• Length: 1377 bp

>NTDB_id=363442 EQK03_RS05360 WP_157418403.1 1065402..1066778(-) (radA) [Bacillus cereus strain DLOU-Weihai]
ATGGCTAAAAAGAAAACAAAATTCACATGTCAAGAGTGTGGTTATCAATCACCAAAATATATGGGTAAATGTCCAGGGTG
TGGTCAATGGAATTCGCTTGTTGAAGAGATGGAACCCGTTGTATCATCCAGACGCCTAAATTATGCAAATGCAATTCAAA
CAGAAGTAACAAAACCAAGACGTCTTACAGAAGTAGAAACAAAGTCTGAGGCACGTATTGAAACAAAATTTCAGGAGTTT
AACCGTGTACTAGGTGGCGGAATTGTAGATGGATCTTTAGTACTTATTGGTGGGGACCCTGGGATTGGAAAATCAACGTT
ATTATTACAGATTTCCTCGCAATTAGCAGATGCTTCATATGATGTATTGTATATATCAGGTGAGGAGTCAGCAAAGCAGA
TTAAACTTCGTGCAGATCGTTTACATGTAAATGGTAGTAATCTATTTGTTGTATCAGAGACAGATTTACAGCGTATTGCA
GCACATATTGAAGAGATGAATCCTGCTTTTGTTGTTATTGATTCTATTCAAACGATACATTTACCTGAAGTGACATCAGC
TCCTGGTAGTGTGGCGCAAGTACGTGAATGTACAGCAGAATTAATGAAACTTGCAAAAACAAAGGGAATCCCAATTTTTA
TCGTAGGGCATGTGACAAAAGAAGGTGCAATTGCGGGACCGCGTATGCTAGAACATATGGTCGATGCAGTTCTTTACTTT
GAAGGAGATCGACACCATACATATCGTATTTTACGAGCTGTAAAGAATCGTTTTGGTTCTACGAATGAAATGGGTATCTT
TGAAATGAAAGAACTTGGCCTTGCAGAAGTCTTAAATCCTTCTGAAATTTTCCTTGAGGAAAGACCAGTTGGAGTTGCAG
GTTCAACAGTAGTTGCCTCAATGGAAGGAACAAGACCAGTTTTAGTAGAAATACAGGCATTAATTTCCCCTACTAGTTTT
GGAAATCCTCGAAGAATGGCGACAGGAATTGATCATAATCGTGTCTCGCTTATTATGGCGGTACTAGAGAAAAGAACAGG
TTTACTATTACAAAATCAAGATGCGTATTTAAAAGTAGCTGGTGGTTTGAAATTAGATGAACCGGCAATTGATTTAGCTA
TTGCCTTAAGTATAGCTTCAAGTTTTAGAGATAAATCTACGGCACCAACTGATGCGGTAATAGGAGAAGTTGGATTAACT
GGAGAAATAAGAAGAGTATCAAGAATCGAACAACGTGTACAAGAAGCAGCTAAATTAGGATTTCAACGTGCTATCATTCC
TAGAAAAAATTTAGGGGGGTGGACAATTCCAGAGGGGATTGAGGTTGTAGGTGTTTCTAATTTAGGAGAAGCGCTTCGTT
TGACATTAGGAGGCTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (60-222)

• Subunit ChlI of Mg-chelatase (ChlI) (363-430)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	74.946	100	0.751
radA	Streptococcus pneumoniae Rx1	63.797	98.908	0.631
radA	Streptococcus pneumoniae D39	63.797	98.908	0.631
radA	Streptococcus pneumoniae R6	63.797	98.908	0.631
radA	Streptococcus pneumoniae TIGR4	63.797	98.908	0.631
radA	Streptococcus mitis SK321	63.797	98.908	0.631
radA	Streptococcus mitis NCTC 12261	63.576	98.908	0.629