Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   E3S62_RS10060 Genome accession   NZ_CP047803
Coordinates   2028157..2028957 (-) Length   266 a.a.
NCBI ID   WP_160200313.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_1097     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2023157..2033957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S62_RS10045 (E3S62_10045) - 2023204..2024460 (-) 1257 WP_000566670.1 MrcB family domain-containing protein -
  E3S62_RS10050 (E3S62_10050) rlmH 2024782..2025261 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E3S62_RS10055 (E3S62_10055) adsA 2025629..2027929 (-) 2301 WP_029549260.1 LPXTG-anchored adenosine synthase AdsA -
  E3S62_RS10060 (E3S62_10060) vicX 2028157..2028957 (-) 801 WP_160200313.1 MBL fold metallo-hydrolase Regulator
  E3S62_RS10065 (E3S62_10065) - 2029345..2030133 (-) 789 WP_001104170.1 two-component system regulatory protein YycI -
  E3S62_RS10070 (E3S62_10070) yycH 2030134..2031468 (-) 1335 WP_001060151.1 two-component system activity regulator YycH -
  E3S62_RS10075 (E3S62_10075) walK 2031461..2033287 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30298.50 Da        Isoelectric Point: 6.1702

>NTDB_id=363395 E3S62_RS10060 WP_160200313.1 2028157..2028957(-) (vicX) [Staphylococcus aureus strain UP_1097]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARIYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=363395 E3S62_RS10060 WP_160200313.1 2028157..2028957(-) (vicX) [Staphylococcus aureus strain UP_1097]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTATATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCATTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGCATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACACCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

48.638

96.617

0.47