Detailed information NTG0363382

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: EUC38_RS01585
• Genome accession: NZ_CP040340
• Coordinates: 295397..296746 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225359.1
• Uniprot ID: -
• Organism: Bacillus cereus strain DLOU-Tangshan
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 290397..301746

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EUC38_RS01550	-	290579..291274 (-)	696	WP_000466505.1	hypothetical protein	-
EUC38_RS01555	-	291261..292049 (-)	789	WP_000120052.1	hypothetical protein	-
EUC38_RS01560	-	292077..292646 (-)	570	WP_001211060.1	hypothetical protein	-
EUC38_RS01565	-	292751..293233 (-)	483	WP_000023374.1	hypothetical protein	-
EUC38_RS01570	raiA	293504..294046 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
EUC38_RS01575	cspC	294369..294566 (-)	198	WP_001990088.1	cold shock protein CspC	-
EUC38_RS01580	-	294693..295397 (-)	705	WP_013142274.1	ComF family protein	-
EUC38_RS01585	comFA	295397..296746 (-)	1350	WP_000225359.1	ATP-dependent helicase ComFA	Machinery gene
EUC38_RS01590	-	297111..298181 (-)	1071	WP_088053892.1	endo-1,4-beta-xylanase	-
EUC38_RS01595	-	298328..298876 (-)	549	WP_088053893.1	DapH/DapD/GlmU-related protein	-
EUC38_RS01600	-	299585..301030 (-)	1446	WP_140387004.1	C40 family peptidase	-
EUC38_RS01605	-	301185..301499 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51115.96 Da
• Isoelectric Point: 9.9910

>NTDB_id=363382 EUC38_RS01585 WP_000225359.1 295397..296746(-) (comFA) [Bacillus cereus strain DLOU-Tangshan]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=363382 EUC38_RS01585 WP_000225359.1 295397..296746(-) (comFA) [Bacillus cereus strain DLOU-Tangshan]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCATATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49