Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   EUC40_RS07090 Genome accession   NZ_CP040336
Coordinates   1351022..1351480 (-) Length   152 a.a.
NCBI ID   WP_000804868.1    Uniprot ID   A0A0J1HZV6
Organism   Bacillus luti strain FJ     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1346022..1356480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EUC40_RS07065 - 1346118..1347659 (-) 1542 WP_156574231.1 MDR family MFS transporter -
  EUC40_RS07070 - 1348091..1348591 (+) 501 WP_000707102.1 hypothetical protein -
  EUC40_RS07075 - 1348623..1348856 (-) 234 WP_071713158.1 SPP1 phage holin family protein -
  EUC40_RS07080 - 1349021..1349674 (+) 654 WP_156574233.1 diguanylate cyclase -
  EUC40_RS07085 - 1350328..1350990 (+) 663 WP_156574235.1 YkyA family protein -
  EUC40_RS07090 kre 1351022..1351480 (-) 459 WP_000804868.1 YkyB family protein Regulator
  EUC40_RS07095 - 1351648..1353195 (+) 1548 WP_244322182.1 Ppx/GppA family phosphatase -
  EUC40_RS07100 - 1353301..1355409 (+) 2109 WP_156574239.1 polyphosphate kinase -
  EUC40_RS07105 - 1355576..1355803 (-) 228 WP_156574241.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17787.52 Da        Isoelectric Point: 10.6793

>NTDB_id=363347 EUC40_RS07090 WP_000804868.1 1351022..1351480(-) (kre) [Bacillus luti strain FJ]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLITEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=363347 EUC40_RS07090 WP_000804868.1 1351022..1351480(-) (kre) [Bacillus luti strain FJ]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCTAAATATTTATACTGGTTAAAAAAGACGGCTTTAGAACGTTTAATTACTGAAA
AAAAAGCGATTAAAGAAGGACTACATTTTTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGCGATTATTTTTTCCATATCCCTCCTACGAAAGAAGATTTTCGAATCCTACCACATCTTGGTCATCTTGAATCCTCCTA
TCGAAACCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCACTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGCCGTACCTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J1HZV6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment