Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | E3S62_RS02590 | Genome accession | NZ_CP047803 |
| Coordinates | 467296..467595 (+) | Length | 99 a.a. |
| NCBI ID | WP_195758580.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1097 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 462296..472595
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S62_RS02550 (E3S62_02550) | - | 462357..462560 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3S62_RS02555 (E3S62_02555) | - | 462557..463543 (+) | 987 | WP_000161307.1 | ROK family glucokinase | - |
| E3S62_RS02560 (E3S62_02560) | - | 463543..463872 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3S62_RS02565 (E3S62_02565) | - | 463869..464492 (+) | 624 | WP_001223009.1 | MBL fold metallo-hydrolase | - |
| E3S62_RS02570 (E3S62_02570) | comGA | 464544..465518 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3S62_RS02575 (E3S62_02575) | comGB | 465490..466560 (+) | 1071 | WP_000776409.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3S62_RS02580 (E3S62_02580) | comGC | 466574..466885 (+) | 312 | WP_000472255.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3S62_RS02585 (E3S62_02585) | comGD | 466863..467309 (+) | 447 | WP_160199701.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3S62_RS02590 (E3S62_02590) | comGE | 467296..467595 (+) | 300 | WP_195758580.1 | competence protein ComGE | Machinery gene |
| E3S62_RS02595 (E3S62_02595) | comGF | 467513..468010 (+) | 498 | WP_001796472.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3S62_RS02600 (E3S62_02600) | - | 468107..468253 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3S62_RS02605 (E3S62_02605) | - | 468243..468767 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| E3S62_RS02610 (E3S62_02610) | gcvT | 468926..470017 (+) | 1092 | WP_000093344.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3S62_RS02615 (E3S62_02615) | gcvPA | 470037..471383 (+) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11119.28 Da Isoelectric Point: 9.9215
>NTDB_id=363346 E3S62_RS02590 WP_195758580.1 467296..467595(+) (comGE) [Staphylococcus aureus strain UP_1097]
MKIYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKIYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=363346 E3S62_RS02590 WP_195758580.1 467296..467595(+) (comGE) [Staphylococcus aureus strain UP_1097]
ATGAAAATCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAATCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |