Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   EUC39_RS11415 Genome accession   NZ_CP040334
Coordinates   2234083..2234877 (+) Length   264 a.a.
NCBI ID   WP_011110369.1    Uniprot ID   A0A9Q5QPF5
Organism   Bacillus cereus strain DLOU-Changhai     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2229083..2239877
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EUC39_RS11400 argR 2229925..2230374 (+) 450 WP_001032580.1 arginine repressor ArgR -
  EUC39_RS11405 recN 2230639..2232378 (+) 1740 WP_000947734.1 DNA repair protein RecN Machinery gene
  EUC39_RS11410 spoIVB 2232497..2233795 (+) 1299 WP_002000940.1 SpoIVB peptidase -
  EUC39_RS11415 spo0A 2234083..2234877 (+) 795 WP_011110369.1 sporulation transcription factor Spo0A Regulator
  EUC39_RS27895 - 2235217..2235329 (+) 113 Protein_2159 hypothetical protein -
  EUC39_RS11420 - 2235536..2237062 (+) 1527 WP_106824130.1 glycosyltransferase family 39 protein -
  EUC39_RS11425 - 2237240..2237386 (-) 147 WP_001247671.1 YycC family protein -
  EUC39_RS11430 - 2237437..2238165 (+) 729 WP_000172589.1 glycerophosphodiester phosphodiesterase -
  EUC39_RS11435 - 2238215..2238448 (-) 234 WP_001190211.1 DUF2627 domain-containing protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29415.18 Da        Isoelectric Point: 7.1175

>NTDB_id=363305 EUC39_RS11415 WP_011110369.1 2234083..2234877(+) (spo0A) [Bacillus cereus strain DLOU-Changhai]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLTDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLKQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANAMIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=363305 EUC39_RS11415 WP_011110369.1 2234083..2234877(+) (spo0A) [Bacillus cereus strain DLOU-Changhai]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAACTAGTATCAATGTTAGAGAGCTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAACTTATTAACAGATAAGCAACCTGATGTACTCG
TTTTAGACATTATTATGCCACACTTAGATGGTTTAGCTGTATTGGAAAAAATGCGACATATTGAAAGGTTAAAACAGCCT
AGCGTAATTATGTTGACAGCATTCGGGCAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCCTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGTGGTAAAGCAAATGCTATGATTAAACGTCCAC
TACCATCATTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGATGCGAGTATTACGAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGATATATGTATTTACGAGAAGCAATCTCCATGGTATACAACGATATCGAATTATT
AGGATCGATTACGAAAGTATTGTATCCAGATATCGCAAAGAAATATAATACCACAGCAAGCCGTGTGGAGCGAGCAATTC
GTCACGCGATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTTCGTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818

Multiple sequence alignment