Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   TCK1_RS24835 Genome accession   NZ_CP040324
Coordinates   5442408..5442809 (-) Length   133 a.a.
NCBI ID   WP_019099364.1    Uniprot ID   A0A1W1YTK7
Organism   Pseudomonas monteilii strain TCU-CK1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5437408..5447809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TCK1_RS24820 (TCK1_4970) - 5439357..5441396 (-) 2040 WP_230852946.1 methyl-accepting chemotaxis protein -
  TCK1_RS24825 (TCK1_4971) - 5441444..5441998 (-) 555 WP_019099365.1 chemotaxis protein CheW -
  TCK1_RS24830 (TCK1_4972) pilH 5441995..5442360 (-) 366 WP_016712413.1 twitching motility response regulator PilH -
  TCK1_RS24835 (TCK1_4973) pilG 5442408..5442809 (-) 402 WP_019099364.1 PleD family two-component system response regulator Regulator
  TCK1_RS24840 (TCK1_4974) gshB 5442963..5443916 (+) 954 WP_016712415.1 glutathione synthase -
  TCK1_RS24845 (TCK1_4975) - 5444008..5444913 (+) 906 WP_019099363.1 energy transducer TonB -
  TCK1_RS24850 (TCK1_4976) - 5445052..5445621 (+) 570 WP_016712417.1 YqgE/AlgH family protein -
  TCK1_RS24855 (TCK1_4977) ruvX 5445621..5446046 (+) 426 WP_012312410.1 Holliday junction resolvase RuvX -
  TCK1_RS24860 (TCK1_4978) pyrR 5446096..5446614 (+) 519 WP_019099362.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  TCK1_RS24865 (TCK1_4979) - 5446627..5447631 (+) 1005 WP_011536054.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14564.85 Da        Isoelectric Point: 6.7116

>NTDB_id=363265 TCK1_RS24835 WP_019099364.1 5442408..5442809(-) (pilG) [Pseudomonas monteilii strain TCU-CK1]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPGIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDRFLTKPFSKEELLDAIRAHVPGFAATQQPAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=363265 TCK1_RS24835 WP_019099364.1 5442408..5442809(-) (pilG) [Pseudomonas monteilii strain TCU-CK1]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGGCGCACCGCACAGATGTTGCTCGGTGAAGC
GGGCTGCGAGGTAATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAAATCGTCGACCACCAGCCCGGCATCATCTTCG
TCGATGTGCTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCGTGATCAAGCACAACAGTGCTTTCAAGGACACGCCG
GTCATCCTGCTGTCGTCGCGCGACGGCCTGTTCGACAAAGCCCGCGGCCGGGTGGTCGGTTCTGATCGGTTTCTGACCAA
GCCGTTCAGCAAAGAAGAACTGCTCGATGCGATCCGCGCCCACGTGCCCGGTTTTGCCGCAACCCAACAACCCGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1W1YTK7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632

Multiple sequence alignment