Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   E3S70_RS13755 Genome accession   NZ_CP047801
Coordinates   2776290..2776760 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain UP_248     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2771290..2781760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S70_RS13735 (E3S70_13735) deoD 2772506..2773216 (-) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  E3S70_RS13740 (E3S70_13740) deoC 2773531..2774193 (+) 663 WP_001083335.1 deoxyribose-phosphate aldolase -
  E3S70_RS13745 (E3S70_13745) - 2774473..2775774 (+) 1302 WP_001242308.1 pyrimidine-nucleoside phosphorylase -
  E3S70_RS13750 (E3S70_13750) - 2775788..2776138 (+) 351 WP_001024028.1 membrane protein -
  E3S70_RS13755 (E3S70_13755) luxS 2776290..2776760 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  E3S70_RS13760 (E3S70_13760) - 2777070..2778254 (+) 1185 WP_001291490.1 M20 family metallopeptidase -
  E3S70_RS13765 (E3S70_13765) ldmS 2778254..2779447 (+) 1194 WP_000183722.1 L-aspartate--L-methionine ligase LdmS -
  E3S70_RS13770 (E3S70_13770) - 2779846..2780517 (+) 672 WP_000120549.1 DUF2750 domain-containing protein -
  E3S70_RS13775 (E3S70_13775) coaW 2780643..2781446 (-) 804 WP_000862728.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=363224 E3S70_RS13755 WP_000164421.1 2776290..2776760(-) (luxS) [Staphylococcus aureus strain UP_248]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=363224 E3S70_RS13755 WP_000164421.1 2776290..2776760(-) (luxS) [Staphylococcus aureus strain UP_248]
ATGACAAAAATGAATGTTGAAAGTTTTAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAGGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404