Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   E3S73_RS13195 Genome accession   NZ_CP047799
Coordinates   2681923..2682393 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain UP_322     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2676923..2687393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S73_RS13165 (E3S73_13165) - 2676962..2677375 (+) 414 WP_001123310.1 thiol-disulfide oxidoreductase DCC family protein -
  E3S73_RS13170 (E3S73_13170) - 2677575..2678018 (+) 444 WP_000070866.1 Dps family protein -
  E3S73_RS13175 (E3S73_13175) deoD 2678130..2678849 (-) 720 WP_160200161.1 purine-nucleoside phosphorylase -
  E3S73_RS13180 (E3S73_13180) deoC 2679164..2679826 (+) 663 WP_001083335.1 deoxyribose-phosphate aldolase -
  E3S73_RS13185 (E3S73_13185) - 2680106..2681407 (+) 1302 WP_001242307.1 pyrimidine-nucleoside phosphorylase -
  E3S73_RS13190 (E3S73_13190) - 2681421..2681771 (+) 351 WP_001024028.1 membrane protein -
  E3S73_RS13195 (E3S73_13195) luxS 2681923..2682393 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  E3S73_RS13200 (E3S73_13200) - 2682703..2683887 (+) 1185 WP_001291490.1 M20 family metallopeptidase -
  E3S73_RS13205 (E3S73_13205) ldmS 2683887..2685080 (+) 1194 WP_160200162.1 L-aspartate--L-methionine ligase LdmS -
  E3S73_RS13210 (E3S73_13210) - 2685479..2686136 (+) 658 Protein_2577 DUF2750 domain-containing protein -
  E3S73_RS13215 (E3S73_13215) coaW 2686262..2687065 (-) 804 WP_000862728.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=363045 E3S73_RS13195 WP_000164421.1 2681923..2682393(-) (luxS) [Staphylococcus aureus strain UP_322]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=363045 E3S73_RS13195 WP_000164421.1 2681923..2682393(-) (luxS) [Staphylococcus aureus strain UP_322]
ATGACAAAAATGAATGTTGAAAGTTTTAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAGGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404