Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   FED54_RS01830 Genome accession   NZ_CP040259
Coordinates   393523..398043 (-) Length   1506 a.a.
NCBI ID   WP_083042138.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain P7774     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 388523..403043
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FED54_RS01800 (FED54_01800) elsL 389487..389990 (-) 504 WP_000077299.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  FED54_RS01805 (FED54_01805) - 390141..390509 (-) 369 WP_001259501.1 YbaN family protein -
  FED54_RS01810 (FED54_01810) - 390614..391522 (+) 909 WP_001017525.1 DUF1853 family protein -
  FED54_RS01815 (FED54_01815) - 391621..391764 (+) 144 WP_001984826.1 entericidin A/B family lipoprotein -
  FED54_RS01820 (FED54_01820) dapE 391890..393026 (+) 1137 WP_001016581.1 succinyl-diaminopimelate desuccinylase -
  FED54_RS01825 (FED54_01825) - 393062..393526 (-) 465 WP_000678920.1 hypothetical protein -
  FED54_RS01830 (FED54_01830) chpA 393523..398043 (-) 4521 WP_083042138.1 hybrid sensor histidine kinase/response regulator Regulator
  FED54_RS01835 (FED54_01835) - 398190..400269 (-) 2080 Protein_352 methyl-accepting chemotaxis protein -
  FED54_RS01840 (FED54_01840) - 400316..400851 (-) 536 Protein_353 chemotaxis protein CheW -
  FED54_RS01845 (FED54_01845) - 400912..401274 (-) 363 WP_000101096.1 PleD family two-component system response regulator -
  FED54_RS01850 (FED54_01850) pilG 401298..401681 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  FED54_RS01855 (FED54_01855) - 401964..402602 (+) 639 WP_002027721.1 hypothetical protein -

Sequence

Protein


Download         Length: 1506 a.a.        Molecular weight: 171745.95 Da        Isoelectric Point: 4.3032

>NTDB_id=362903 FED54_RS01830 WP_083042138.1 393523..398043(-) (chpA) [Acinetobacter baumannii strain P7774]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFIEEIEEIFVDLQPLINKWMQSENIATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWAVEDTLNRVINQSLQLTPTIQSYVQLVFKFYFLKLVDNFKQKRAHTLDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLMAETVTGLELDYIEQDSLAEPIIQATHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSRYSSSEQLEARLQQFNQSWDAYVEQ
HGDRTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYEV
LLDKPTLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGVVKQHQSILEELKLYTQYTPDLSNDLPQQDSTSFEPISNIEQ
EPEVVATVENFSDSVDWAVLGQSVQQDRQYISSTQVNRNFDADLLDIFLEEAEELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGLIAHELESIYERLIQKQLVATSDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPLPVVEAFDTESEIFSEQEVISEVIIDEIPVELEPALAELETHHDQVFDTAVTELATPVEMITTVTSQESEIA
ADEQDIEAVVEQTFLEEATELLEMAESLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEVVQAIAYQLENAFEQFAL
HHFNSNIYDHLLESAIAWLKDAIFNHNYQHFDGLQQSLENIQFFETTIQIPTKLTRADLFSSEPVMTFIQGDGTEPPPMM
GAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQIIAKH
GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLLP
RLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQQANKPETGRIELNIQRQGTDV
VVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGHVSVES
VYGQGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIIRVSPASLEQYFESPQELFEYENKRYPLRYLSEFVGNQP
IPRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQST
QRHKQLSEAVYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE
VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVASESEVKS

Nucleotide


Download         Length: 4521 bp        

>NTDB_id=362903 FED54_RS01830 WP_083042138.1 393523..398043(-) (chpA) [Acinetobacter baumannii strain P7774]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAGATCTTCATTGAAGAAATTGAAGAGATTTTTGTTGATTTGCAACCTTTGATAAATAAATGGATGCAGTCTGAGAATA
TTGCTACGCTCACTGAAATTCGTCGTCATTTCCATACCTTAAAAGGTTCCGGAAGAATGATTGGCGCTAAATCTTCAGCT
GAGCTTGCGTGGGCAGTTGAAGATACACTCAACCGGGTAATCAACCAAAGCTTACAATTAACGCCAACTATTCAGAGCTA
TGTGCAGTTAGTATTTAAGTTCTATTTCCTTAAATTAGTAGATAATTTTAAGCAAAAACGAGCACATACCTTAGATTTCA
GACCTCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAGCCAGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTATGGCCGAAACAGTGACTGGTCTTGAGCTAGATTATATTGAACAAGATTCGTTAGCCGAGCCAATCATTCA
AGCTACACATACTGAAATTGAAATAAATCTAGATGAAACCTTGACCTTATTTATGGAAGAGGCGGAAGAACATTTAGCCA
CGATTCATCAATTTTTGGATCAAGAGTTACATCAGTACGACAGTTATAACGCTTTAATCCGCGCTTTACATACTTTGCGT
GGTAGCTCTGCAATGGCACAGGTCGAAACAATTTTCGAGGCCAGTACCAAAGTTGAGCATTTATTTAAAATACTGCTACA
AGAAGAGTTATCTTCTCACTCTGAAGAAATTTTATTATTACAAGAATATCGTGAGTTTGTTCGAGATAGCTTGGAACTAC
TATCTAGATATAGTTCAAGTGAACAGCTCGAAGCGAGATTGCAGCAATTTAATCAATCTTGGGATGCATATGTTGAGCAA
CATGGTGACCGAACAGATCCGTTAATGCCTTCTCATGGCTTGGTATCGCAATTATTACAATTAGATGTTTCTGAATTACT
GGATGCAGAATTAGATTTTGAGAAGGGTATTCGTAATGAGTTTCCTGATTATCTTGAACGCCTAAGTGAACAGGCTGATT
TATTACTGCAACATACACATTCTCAAGCAATGTTGGGTTTACATGAATATACCAGCCAACTGAAAGAAAGTTATGAAGTG
CTGCTTGATAAACCTACTTTATTACAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTCATTCAATT
ATTTGATGCTTTAGCTGCTGGTCAGCGAGTCGGTGTTGTTAAGCAACATCAAAGTATTTTAGAAGAATTAAAACTTTATA
CGCAGTACACTCCAGACCTATCAAATGACCTGCCTCAGCAGGATTCGACATCTTTTGAACCAATATCCAATATTGAACAA
GAGCCAGAAGTAGTAGCTACTGTAGAGAATTTCTCAGACTCTGTAGACTGGGCGGTATTAGGTCAAAGTGTGCAGCAAGA
TCGACAATATATTTCATCTACACAAGTGAATCGAAATTTTGATGCTGATCTTTTAGATATCTTTCTTGAGGAAGCTGAAG
AATTACTTGAGGGAATTGATACCGATCTTAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCTCTGAACAACCTAATG
CGTTATTTGCATACCTTGAAAGGGGGAGCAAATATGGTTCAGGCAACGTATCTTGGTTTGATTGCCCATGAATTAGAAAG
CATTTATGAGCGTTTAATTCAAAAGCAATTAGTAGCAACTTCAGATTTAATTGATTTTATTCGTTTGGTTCAAGATGACT
TGGCTGACCGTTTACAAATCATGCGTGAACAACAACTAGATTATGCAGCCCCTTACACAATTAACGCATTAAAACGAGCG
GGTCAAAACTCTAACTTCCAACCTTTACCAGTGGTTGAGGCATTTGATACTGAAAGTGAGATATTCTCTGAGCAAGAGGT
GATATCTGAAGTAATAATAGATGAGATACCAGTAGAACTTGAACCTGCTCTTGCAGAGTTAGAAACTCATCACGATCAGG
TATTCGACACAGCGGTTACTGAGTTAGCTACTCCAGTTGAGATGATTACTACGGTTACATCGCAAGAGAGTGAAATTGCA
GCTGATGAACAGGACATTGAGGCTGTTGTTGAACAGACGTTCCTAGAAGAAGCTACTGAATTGTTAGAAATGGCTGAGTC
GCTATTAAAACAATGGTTTGAACAACGTACAAACCGTAGTATTTTGCTTCAGCTACAAAGAGCCGTGCACAGTTTGAAAG
GTGGTGCACGAATGGTGGGTTTAGAAGTCGTACAAGCAATTGCCTACCAACTAGAAAATGCTTTTGAACAATTTGCGTTG
CATCACTTCAATTCAAATATTTATGATCATTTATTAGAAAGTGCAATTGCATGGTTAAAAGATGCAATTTTCAACCATAA
CTATCAGCATTTCGATGGATTACAGCAAAGTTTAGAAAATATTCAATTCTTTGAAACTACAATCCAGATTCCGACTAAGT
TAACTAGAGCGGACTTGTTTAGCTCAGAACCGGTGATGACCTTTATACAAGGTGATGGTACAGAGCCTCCACCAATGATG
GGAGCATGGGAGCAAACAGAGCGTCTGGATCAGAATAATGAAATGATCCGTGTTTCAGCCGACTTAATCGAGAAAATGAT
TGATTTGTCTGGTGAAAACTCCATTAACCGTTCACGAATTGAAATGGACCTAAGCCAGTTTAGCCATACACTAGTTGAAA
TGGAGTTGGCGATTCAACGACTTGCCGATCAGTTACGACGAATGGAAGGTGAGTTAGAAACACAGATTATTGCTAAACAT
GGAATTGAACATTCTCGTTATACCGACTTTGATCCGTTAGAGATGGACCAGTATTCATCTTTAAATCAATTGTCGAAATC
GCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTGACAAGATCAGAGATACCGAAAGTTTGCTTT
TACAACAATCACGAATTCAAGCGGAAATTCAAGAAGGTTTAATGCGGACACGTTTGGTCCCATTTTCGCGTTTATTGCCG
CGTTTACAACGAATTGTTCGTCAGACGTCTACAGCATTGAATAGACCTGCTGAGCTTTTCGTAAATAATACAGAAGGTGA
GTTGGACCGCAACATTTTAGAACGGTTAGTGACTCCGCTTGAGCATATGCTCAGAAACGCAATTGACCATGGTTTAGAGG
ACCGAGCGCAGCGGCAACAAGCAAATAAACCGGAAACAGGGCGTATTGAACTTAATATTCAGCGTCAAGGTACGGATGTT
GTGGTTGTCTTTAGTGATGATGGTCAAGGTATTGATGTTGAAAAAGTACGTCAGAAAGCACTCCTTGCCGGATTGATCAA
GCCAGAACAAGACTTAGAACAGCAAGACATACTGCAACTCATTTTCCATCCAGGTTTAAGTACAGCCGAGCAAGTCACTC
AGATTTCCGGGCGTGGTGTAGGTCTTGATGTCGTGCAGAGTGATATTAAGTCTTTGGGGGGACATGTCAGCGTTGAATCC
GTCTATGGGCAGGGAACAACATTTACGATTCGCGTACCGACTACAGTAGCGGTAAGTGATGCCTTAATGGTGAAAGTGGC
AGATCAACAATTTGCGATTCCACTCGCTCAAATCGATCGAATTATTCGAGTGTCACCAGCCTCTTTAGAGCAGTATTTTG
AAAGTCCTCAAGAACTATTTGAGTATGAAAATAAACGTTATCCATTACGTTATCTTTCTGAATTTGTTGGTAACCAACCC
ATACCACGTTTAAATGGTGTGATGTATTCATTACCTGTGTTAATGATTAAAGCCAATAATGGCCAAACTGTGGCACTACT
TGTTGACCAGTTAATTGGCTCTCGAGCACAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGAGCAATTG
CAGGCGCCACAATTTTAGGTGATGGACAGGTCTGCTTAATTTTAGACGGACAAAATATTGCGCGACAAATTCAGTCAACT
CAGCGTCATAAACAACTTAGTGAAGCAGTGTATAGACAACGAGAGTCTGATGAACGCCGCCTCATCATGATTGTAGATGA
CTCAGTAACTGTACGTAAGGTCACGTCCCGATTGCTTGAACGTCAAGGCTATGATGTGGTTACGGCTAAAGATGGTGTTG
ACGCCATAGAGCAGTTAGAAAATATTAAGCCAGATTTGATGCTACTTGATATTGAAATGCCACGTATGGATGGTTTTGAG
GTTCTCAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCTAGAACAGGCGAAAAACA
TCGTGAACGAGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCTTTCCAAGAAGAAGAGTTACTAGAGAATATCG
ATGCTTTACTTGTAGCGTCTGAAAGTGAGGTCAAATCATGA

Domains

Predicted by InterproScan.

CheW-like domain (CheW)

(1221-1356)

Hpt domain (Hpt)

(25-106)

Hpt domain (Hpt)

(523-612)

Hpt domain (Hpt)

(199-281)

Hpt domain (Hpt)

(732-796)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1078-1214)

Response regulator receiver domain (Response_reg)

(1382-1493)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

98.805

100

0.988

Multiple sequence alignment