Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   FD746_RS10915 Genome accession   NZ_CP040232
Coordinates   2153802..2154518 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain GD1706     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2148802..2159518
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD746_RS10885 (FD746_10910) - 2149070..2149696 (+) 627 WP_000522384.1 nitroreductase family protein -
  FD746_RS10890 (FD746_10915) - 2150004..2150789 (+) 786 WP_000867947.1 carbon-nitrogen family hydrolase -
  FD746_RS14890 hld 2151391..2151471 (-) 81 WP_000046022.1 delta-hemolysin -
  FD746_RS10900 (FD746_10925) agrB 2151760..2152329 (+) 570 WP_001105708.1 accessory gene regulator AgrB -
  FD746_RS10905 (FD746_10930) agrD 2152326..2152466 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  FD746_RS10910 (FD746_10935) agrC 2152491..2153783 (+) 1293 WP_001825886.1 quorum-sensing sensor histidine kinase AgrC -
  FD746_RS10915 (FD746_10940) agrA 2153802..2154518 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  FD746_RS10920 (FD746_10945) - 2154892..2155851 (-) 960 WP_001253294.1 carbohydrate kinase family protein -
  FD746_RS10925 (FD746_10950) - 2155848..2157332 (-) 1485 WP_000141407.1 sucrose-6-phosphate hydrolase -
  FD746_RS10930 (FD746_10955) - 2157481..2158431 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=362721 FD746_RS10915 WP_000688492.1 2153802..2154518(+) (agrA) [Staphylococcus aureus strain GD1706]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=362721 FD746_RS10915 WP_000688492.1 2153802..2154518(+) (agrA) [Staphylococcus aureus strain GD1706]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment