Detailed information    

insolico Bioinformatically predicted

Overview


Name   treR   Type   Regulator
Locus tag   FD735_RS01655 Genome accession   NZ_CP040231
Coordinates   295117..295830 (-) Length   237 a.a.
NCBI ID   WP_139658337.1    Uniprot ID   A0A5B7Y753
Organism   Streptococcus sp. 1643     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 290117..300830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FD735_RS01655 (FD735_01655) treR 295117..295830 (-) 714 WP_139658337.1 trehalose operon repressor Regulator
  FD735_RS01660 (FD735_01660) treP 296015..298033 (+) 2019 WP_176553045.1 PTS system trehalose-specific EIIBC component -
  FD735_RS01665 (FD735_01665) treC 298097..299722 (+) 1626 WP_139658338.1 alpha,alpha-phosphotrehalase -
  FD735_RS01670 (FD735_01670) - 299867..300112 (+) 246 WP_084881296.1 YneF family protein -

Sequence


Protein


Download         Length: 237 a.a.        Molecular weight: 27794.89 Da        Isoelectric Point: 7.4576

>NTDB_id=362630 FD735_RS01655 WP_139658337.1 295117..295830(-) (treR) [Streptococcus sp. 1643]
MKKYQQLFKQIQKTIQNETYAIGDFLPSEHELMNQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVQELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIEDDLKLNIDYAQKEITIDHTSDRDKILMDIAKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFHFVDFAKRHPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=362630 FD735_RS01655 WP_139658337.1 295117..295830(-) (treR) [Streptococcus sp. 1643]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAAAAACCATTCAAAACGAGACTTACGCTATCGGAGATTTCCTCCC
CAGCGAACACGAACTCATGAATCAGTATCAGGTGAGCCGTGACACCGTCCGAAAAGCTCTGTCCCTCCTCCAAGAAGAAG
GATTAATCAAAAAGATAAGGGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTCTCCAACCTAACC
AGCTACCAAGAACTGGTACAGGAACTTGGACTTCGCTCTAAGACCAATGTGGTCAGTCTAGATAAAATCATTATCGATAA
AAAATCCTCACTAATAACCGGCTTTCCAGAGTTTCGGATGGTGTGGAAGGTGGTCCGCCAGCGTGTAGTGGATGACCTGG
TATCGGTTCTGGATACGGACTATCTAGATATGGAACTGATCCCAAATCTCACTCGCCAAATCGCTGAGCAGTCTATCTAC
TCGTATATAGAGGACGACCTCAAACTTAACATCGATTATGCTCAGAAAGAAATCACCATTGACCACACCAGTGACCGAGA
CAAGATTCTCATGGATATTGCCAAAGACCCTTATGTCGTTTCGATCAAGTCAAAAGTCTATCTCCAAGACGGGCGCCAGT
TCCAATTCACCGAAAGTCGCCATAAATTAGAAAAATTTCACTTTGTTGACTTTGCCAAAAGACATCCGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5B7Y753

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

58.723

99.156

0.582


Multiple sequence alignment