Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | FD482_RS07380 | Genome accession | NZ_CP040229 |
| Coordinates | 1555331..1555630 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain GD487 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1550331..1560630
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FD482_RS07355 (FD482_07585) | gcvPA | 1551543..1552889 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| FD482_RS07360 (FD482_07590) | gcvT | 1552909..1554000 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| FD482_RS07365 (FD482_07595) | - | 1554159..1554683 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| FD482_RS07370 (FD482_07600) | - | 1554673..1554819 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| FD482_RS07375 (FD482_07605) | comGF | 1554916..1555413 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| FD482_RS07380 (FD482_07610) | comGE | 1555331..1555630 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| FD482_RS07385 (FD482_07615) | comGD | 1555617..1556063 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| FD482_RS07390 (FD482_07620) | comGC | 1556041..1556351 (-) | 311 | Protein_1470 | competence type IV pilus major pilin ComGC | - |
| FD482_RS07395 (FD482_07625) | comGB | 1556365..1557435 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FD482_RS07400 (FD482_07630) | comGA | 1557407..1558381 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FD482_RS07405 (FD482_07635) | - | 1558433..1559056 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| FD482_RS07410 (FD482_07640) | - | 1559053..1559382 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| FD482_RS07415 (FD482_07645) | - | 1559382..1560368 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| FD482_RS07420 (FD482_07650) | - | 1560365..1560568 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=362544 FD482_RS07380 WP_000844413.1 1555331..1555630(-) (comGE) [Staphylococcus aureus strain GD487]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=362544 FD482_RS07380 WP_000844413.1 1555331..1555630(-) (comGE) [Staphylococcus aureus strain GD487]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |