Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FAY22_RS13485 Genome accession   NZ_CP040128
Coordinates   2933021..2933422 (-) Length   133 a.a.
NCBI ID   WP_146330686.1    Uniprot ID   A0A5B8N8M8
Organism   Noviherbaspirillum sp. UKPF54     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2928021..2938422
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FAY22_RS13470 (FAY22_13470) - 2929688..2932012 (-) 2325 WP_146330683.1 methyl-accepting chemotaxis protein -
  FAY22_RS13475 (FAY22_13475) - 2932057..2932626 (-) 570 WP_146330684.1 chemotaxis protein CheW -
  FAY22_RS13480 (FAY22_13480) - 2932633..2932998 (-) 366 WP_146330685.1 response regulator transcription factor -
  FAY22_RS13485 (FAY22_13485) pilG 2933021..2933422 (-) 402 WP_146330686.1 PleD family two-component system response regulator Regulator
  FAY22_RS13490 (FAY22_13490) - 2933578..2933730 (-) 153 WP_040042419.1 rubredoxin -
  FAY22_RS13495 (FAY22_13495) - 2933827..2934657 (+) 831 WP_146330687.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  FAY22_RS13500 (FAY22_13500) hemL 2934682..2935965 (+) 1284 WP_146330688.1 glutamate-1-semialdehyde 2,1-aminomutase -
  FAY22_RS13505 (FAY22_13505) corA 2936014..2936976 (-) 963 WP_146330689.1 magnesium/cobalt transporter CorA -
  FAY22_RS13510 (FAY22_13510) - 2937303..2937707 (-) 405 WP_146330690.1 hypothetical protein -
  FAY22_RS13515 (FAY22_13515) mtgA 2937723..2938418 (-) 696 WP_146330691.1 monofunctional biosynthetic peptidoglycan transglycosylase -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14554.87 Da        Isoelectric Point: 8.4755

>NTDB_id=362398 FAY22_RS13485 WP_146330686.1 2933021..2933422(-) (pilG) [Noviherbaspirillum sp. UKPF54]
MTTSADNASLKIMVIDDSSTIRRSAEIFLGQAGYQVVLAEDGFDALAKMNDHKPALIFCDILMPRLDGYQTCALIKKSAK
FHSTPVIMLSSKDGLFDRARGAMVGSDAYLTKPFTKDSLLKTVREYTAQALAK

Nucleotide


Download         Length: 402 bp        

>NTDB_id=362398 FAY22_RS13485 WP_146330686.1 2933021..2933422(-) (pilG) [Noviherbaspirillum sp. UKPF54]
ATGACAACATCAGCGGATAACGCCAGTCTCAAGATCATGGTGATCGACGATAGCAGCACGATTCGTCGTTCAGCAGAAAT
TTTCTTGGGGCAGGCTGGTTACCAGGTTGTGCTTGCCGAGGATGGCTTCGACGCCCTCGCCAAAATGAACGACCACAAGC
CAGCCCTGATTTTTTGTGACATCCTGATGCCGCGTCTTGACGGCTACCAGACCTGCGCGCTGATCAAGAAAAGCGCGAAA
TTCCATTCCACGCCGGTCATCATGCTGTCGTCCAAGGACGGGCTGTTCGACCGGGCACGCGGAGCCATGGTCGGCTCCGA
CGCTTATCTCACCAAACCCTTTACCAAAGACAGTTTGCTCAAGACGGTGCGCGAATACACCGCTCAAGCGCTTGCCAAGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5B8N8M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

60.833

90.226

0.549

Multiple sequence alignment