Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   E3S88_RS04895 Genome accession   NZ_CP047792
Coordinates   985577..986200 (-) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain UP_794     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 980577..991200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S88_RS04870 (E3S88_04870) rpmG 982154..982303 (+) 150 WP_001265708.1 50S ribosomal protein L33 -
  E3S88_RS04875 (E3S88_04875) rpsN 982756..983025 (+) 270 WP_001085655.1 30S ribosomal protein S14 -
  E3S88_RS04880 (E3S88_04880) guaC 983182..984159 (+) 978 WP_124781667.1 GMP reductase -
  E3S88_RS04890 (E3S88_04890) - 984181..985197 (+) 1017 WP_185648676.1 CAP domain-containing protein -
  E3S88_RS04895 (E3S88_04895) dinR/lexA 985577..986200 (-) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  E3S88_RS04900 (E3S88_04900) sosA 986343..986576 (+) 234 WP_078369197.1 DNA damage-induced cell division inhibitor SosA -
  E3S88_RS04905 (E3S88_04905) - 986713..986952 (+) 240 WP_000071351.1 DUF896 domain-containing protein -
  E3S88_RS04910 (E3S88_04910) recP/tkt 987073..989061 (+) 1989 WP_124781669.1 transketolase Machinery gene
  E3S88_RS04915 (E3S88_04915) - 989339..989581 (+) 243 WP_000246909.1 YneF family protein -
  E3S88_RS04920 (E3S88_04920) - 989568..989666 (+) 99 WP_001789897.1 hypothetical protein -
  E3S88_RS04925 (E3S88_04925) - 989760..990227 (+) 468 WP_000966144.1 CcdC family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=362380 E3S88_RS04895 WP_001208755.1 985577..986200(-) (dinR/lexA) [Staphylococcus aureus strain UP_794]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=362380 E3S88_RS04895 WP_001208755.1 985577..986200(-) (dinR/lexA) [Staphylococcus aureus strain UP_794]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GCTATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCAGTAGAAAATATTGAAGAATATTT
TCCATTACCTGAACACTTAACATCGACACACAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGCATATTAGACGGGGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATATACCTCGACAATGTTGCTGTAATAGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657

Multiple sequence alignment