Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   E3S88_RS01815 Genome accession   NZ_CP047792
Coordinates   358727..359401 (+) Length   224 a.a.
NCBI ID   WP_001166499.1    Uniprot ID   Q6GJ11
Organism   Staphylococcus aureus strain UP_794     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 353727..364401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S88_RS01790 (E3S88_01790) - 353954..355021 (+) 1068 WP_000980142.1 membrane protein -
  E3S88_RS01795 (E3S88_01795) - 355172..356215 (+) 1044 WP_001030761.1 alpha/beta hydrolase -
  E3S88_RS01800 (E3S88_01800) - 356543..356971 (+) 429 WP_000198502.1 hypothetical protein -
  E3S88_RS01805 (E3S88_01805) - 357169..357675 (-) 507 WP_124781377.1 GNAT family N-acetyltransferase -
  E3S88_RS01810 (E3S88_01810) graX 357788..358711 (+) 924 WP_124781375.1 auxiliary protein GraX/ApsX -
  E3S88_RS01815 (E3S88_01815) braR 358727..359401 (+) 675 WP_001166499.1 response regulator transcription factor GraR/ApsR Regulator
  E3S88_RS01820 (E3S88_01820) graS 359394..360434 (+) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  E3S88_RS01825 (E3S88_01825) vraF 360581..361342 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  E3S88_RS01830 (E3S88_01830) - 361332..363221 (+) 1890 WP_111680112.1 FtsX-like permease family protein -

Sequence


Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.3968

>NTDB_id=362350 E3S88_RS01815 WP_001166499.1 358727..359401(+) (braR) [Staphylococcus aureus strain UP_794]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVIDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=362350 E3S88_RS01815 WP_001166499.1 358727..359401(+) (braR) [Staphylococcus aureus strain UP_794]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCATTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q6GJ11

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406