Detailed information NTG0362076

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: FDP11_RS04475
• Genome accession: NZ_CP040099
• Coordinates: 1036005..1037102 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain LVP1
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1031005..1042102

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDP11_RS04460 (FDP11_04770)	-	1031669..1032724 (-)	1056	WP_015313427.1	HlyD family secretion protein	-
FDP11_RS04465 (FDP11_04775)	-	1032762..1033217 (-)	456	WP_025525184.1	MarR family transcriptional regulator	-
FDP11_RS04470 (FDP11_04780)	luxQ	1033429..1036005 (-)	2577	WP_178981273.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
FDP11_RS04475 (FDP11_04785)	luxP	1036005..1037102 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
FDP11_RS04480 (FDP11_04790)	-	1037454..1037774 (-)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
FDP11_RS04485 (FDP11_04795)	-	1037771..1038421 (-)	651	WP_178981275.1	YceH family protein	-
FDP11_RS04490 (FDP11_04800)	-	1038598..1038813 (-)	216	WP_005477197.1	hypothetical protein	-
FDP11_RS04495 (FDP11_04810)	-	1039141..1039455 (+)	315	WP_005453573.1	DUF496 family protein	-
FDP11_RS04500 (FDP11_04815)	-	1039578..1040915 (+)	1338	WP_005463462.1	MATE family efflux transporter	-
FDP11_RS04505 (FDP11_04820)	-	1040989..1041966 (-)	978	WP_045587375.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=362076 FDP11_RS04475 WP_005463467.1 1036005..1037102(-) (luxP) [Vibrio parahaemolyticus strain LVP1]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=362076 FDP11_RS04475 WP_005463467.1 1036005..1037102(-) (luxP) [Vibrio parahaemolyticus strain LVP1]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTTGAACATGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAGCCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644