Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BSNT_RS21875 Genome accession   NC_017196
Coordinates   4095331..4096179 (-) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis subsp. natto BEST195     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4090331..4101179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSNT_RS21855 (BSNT_06274) yyaE 4090844..4092847 (-) 2004 WP_014481509.1 molybdopterin-dependent oxidoreductase -
  BSNT_RS21860 (BSNT_06275) yyzM 4092898..4093104 (-) 207 WP_003226838.1 DUF951 family protein -
  BSNT_RS21865 (BSNT_06277) - 4093198..4094214 (-) 1017 WP_010886647.1 membrane protein -
  BSNT_RS21870 (BSNT_06278) yyaC 4094674..4095291 (+) 618 WP_003243890.1 spore protease YyaC -
  BSNT_RS21875 (BSNT_06280) spo0J 4095331..4096179 (-) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  BSNT_RS21880 (BSNT_06281) soj 4096172..4096933 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  BSNT_RS21885 (BSNT_06282) yyaB 4097181..4097621 (+) 441 WP_014481510.1 PH domain-containing protein -
  BSNT_RS21890 (BSNT_06283) noc 4097672..4098523 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  BSNT_RS21895 (BSNT_06286) rsmG 4098645..4099364 (-) 720 WP_014481512.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=36207 BSNT_RS21875 WP_003226832.1 4095331..4096179(-) (spo0J) [Bacillus subtilis subsp. natto BEST195]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=36207 BSNT_RS21875 WP_003226832.1 4095331..4096179(-) (spo0J) [Bacillus subtilis subsp. natto BEST195]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAATCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAGCGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387

Multiple sequence alignment