Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   GALLO_RS08050 Genome accession   NC_013798
Coordinates   1633956..1634765 (-) Length   269 a.a.
NCBI ID   WP_009854644.1    Uniprot ID   A0A1H7V9H2
Organism   Streptococcus gallolyticus UCN34     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1628956..1639765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GALLO_RS08040 (GALLO_1550) smc 1629070..1632609 (-) 3540 WP_012962236.1 chromosome segregation protein SMC -
  GALLO_RS08045 (GALLO_1551) rnc 1632740..1633426 (-) 687 WP_009854642.1 ribonuclease III -
  GALLO_RS08050 (GALLO_1552) vicX 1633956..1634765 (-) 810 WP_009854644.1 MBL fold metallo-hydrolase Regulator
  GALLO_RS08055 (GALLO_1553) vicK 1634766..1636118 (-) 1353 WP_009854645.1 cell wall metabolism sensor histidine kinase VicK Regulator
  GALLO_RS08060 (GALLO_1554) vicR 1636111..1636821 (-) 711 WP_009854646.1 response regulator YycF Regulator
  GALLO_RS08065 (GALLO_1555) - 1637126..1637890 (+) 765 WP_009854647.1 amino acid ABC transporter ATP-binding protein -
  GALLO_RS08070 (GALLO_1556) - 1637901..1638713 (+) 813 WP_014620198.1 transporter substrate-binding domain-containing protein -
  GALLO_RS08075 (GALLO_1557) - 1638730..1639434 (+) 705 WP_009854649.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30298.24 Da        Isoelectric Point: 5.3852

>NTDB_id=36202 GALLO_RS08050 WP_009854644.1 1633956..1634765(-) (vicX) [Streptococcus gallolyticus UCN34]
MSENAFKYSILASGSTGNSFYVETPQKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDLAQKHIFERGKTLTLGDIDIESFGVSHDAVEPQFYRLMKDNKSFVVLTDTGYVSDRMAG
IIENADGYLIESNHDVEILRSGSYPWSLKQRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLIQADFGVGYDMKVFDTSPDEATPLTEL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=36202 GALLO_RS08050 WP_009854644.1 1633956..1634765(-) (vicX) [Streptococcus gallolyticus UCN34]
ATGTCTGAAAATGCTTTTAAATATAGTATTTTAGCCTCCGGTTCAACTGGAAATTCTTTTTATGTGGAAACACCACAAAA
ACGTTTTTTGATTGATGCGGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCAGAAGACT
TAGATGCTATTTTTATTACACACGAACATTCTGACCATATCAAAGGAGTTGGGGTGTTAGCACGTCGTTATAATCTTGAT
GTTTATGCGAATGAAAAAACGTGGCAAATGATTGATGAGCGAAATATGATTGGAAAGCTTGATTTAGCTCAAAAACATAT
TTTTGAACGTGGGAAAACATTGACACTTGGTGACATTGATATTGAAAGTTTTGGTGTTAGCCACGATGCCGTTGAGCCAC
AATTTTATCGTTTGATGAAAGATAATAAATCATTTGTTGTCTTAACAGATACAGGTTATGTTAGTGACCGCATGGCAGGA
ATTATTGAAAATGCTGACGGTTACTTGATTGAATCGAATCATGACGTTGAGATTTTACGTTCAGGCTCTTATCCGTGGAG
TTTGAAACAACGTATCCTATCTGATAAAGGACACTTGTCAAACGAAGATGGTGCTGGGACAATGATTCGAACCATTGGAA
ATCGCACGAAGAAAATTTACCTTGGACATTTGAGTAAAGAAAACAATATCAAAGAATTGGCTCACATGACCATGGAAAAT
AATCTTATTCAAGCTGACTTTGGGGTTGGTTATGACATGAAAGTCTTTGATACCTCACCAGACGAAGCAACACCATTAAC
AGAGTTATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H7V9H2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment