Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | GALLO_RS06750 | Genome accession | NC_013798 |
| Coordinates | 1358251..1358691 (-) | Length | 146 a.a. |
| NCBI ID | WP_012962070.1 | Uniprot ID | A0A139MWJ9 |
| Organism | Streptococcus gallolyticus UCN34 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1350665..1375040 | 1358251..1358691 | within | 0 |
Gene organization within MGE regions
Location: 1350665..1375040
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GALLO_RS06715 (GALLO_1283) | - | 1350665..1351438 (-) | 774 | WP_009854387.1 | ABC transporter ATP-binding protein | - |
| GALLO_RS06720 (GALLO_1284) | - | 1351451..1352371 (-) | 921 | WP_012962066.1 | glycine betaine ABC transporter substrate-binding protein | - |
| GALLO_RS06725 (GALLO_1285) | - | 1352361..1352996 (-) | 636 | WP_009854389.1 | ABC transporter permease | - |
| GALLO_RS06730 (GALLO_1286) | - | 1352986..1353438 (-) | 453 | WP_009854390.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| GALLO_RS06735 (GALLO_1287) | - | 1353428..1354405 (-) | 978 | WP_012962067.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| GALLO_RS06740 (GALLO_1288) | rcrQ | 1354671..1356443 (-) | 1773 | WP_012962068.1 | ABC transporter ATP-binding protein | Regulator |
| GALLO_RS06745 (GALLO_1289) | rcrP | 1356433..1358247 (-) | 1815 | WP_012962069.1 | ABC transporter ATP-binding protein | Regulator |
| GALLO_RS06750 (GALLO_1290) | rcrR | 1358251..1358691 (-) | 441 | WP_012962070.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| GALLO_RS06755 (GALLO_1291) | - | 1358866..1359276 (-) | 411 | WP_012962071.1 | peptide deformylase | - |
| GALLO_RS06760 (GALLO_1292) | - | 1359273..1359782 (-) | 510 | WP_012962072.1 | GNAT family N-acetyltransferase | - |
| GALLO_RS06765 (GALLO_1293) | gdhA | 1360049..1361398 (-) | 1350 | WP_012962073.1 | NADP-specific glutamate dehydrogenase | - |
| GALLO_RS06770 (GALLO_1294) | - | 1361645..1362142 (+) | 498 | WP_009854399.1 | DUF308 domain-containing protein | - |
| GALLO_RS12005 (GALLO_1295) | queF | 1362199..1362690 (-) | 492 | WP_012962074.1 | preQ(1) synthase | - |
| GALLO_RS12010 (GALLO_1296) | queE | 1362703..1363416 (-) | 714 | WP_012962075.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| GALLO_RS06785 (GALLO_1297) | queD | 1363409..1363855 (-) | 447 | WP_012962076.1 | 6-carboxytetrahydropterin synthase QueD | - |
| GALLO_RS06790 (GALLO_1298) | queC | 1363855..1364508 (-) | 654 | WP_012962077.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| GALLO_RS06795 (GALLO_1299) | - | 1364749..1366518 (-) | 1770 | WP_012962078.1 | ABC transporter ATP-binding protein | - |
| GALLO_RS06800 (GALLO_1300) | - | 1366521..1368260 (-) | 1740 | WP_012962079.1 | ABC transporter ATP-binding protein | - |
| GALLO_RS06805 (GALLO_1301) | - | 1368338..1370209 (-) | 1872 | WP_012962080.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| GALLO_RS06810 (GALLO_1302) | - | 1370206..1371411 (-) | 1206 | WP_012962081.1 | CCA tRNA nucleotidyltransferase | - |
| GALLO_RS06815 (GALLO_1303) | dapB | 1371408..1372175 (-) | 768 | WP_009854408.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| GALLO_RS06820 (GALLO_1304) | - | 1372195..1373043 (-) | 849 | WP_012962082.1 | DegV family protein | - |
| GALLO_RS06825 (GALLO_1305) | - | 1373043..1373423 (-) | 381 | WP_009854410.1 | DUF1149 family protein | - |
| GALLO_RS06830 (GALLO_1306) | - | 1373552..1374325 (-) | 774 | WP_009854411.1 | TMEM175 family protein | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 17156.66 Da Isoelectric Point: 9.3565
>NTDB_id=36200 GALLO_RS06750 WP_012962070.1 1358251..1358691(-) (rcrR) [Streptococcus gallolyticus UCN34]
MHKKDPFSQFRDFINLMENRVHALAESHGVENLAGPQGFAVMYLRDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQVVSSKEDKRYKQVVLTELGKSKAQDIQDFHDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE
MHKKDPFSQFRDFINLMENRVHALAESHGVENLAGPQGFAVMYLRDNPDKEIYIKDIEKRLRISKSVTSNLIKRMEKNGF
IQVVSSKEDKRYKQVVLTELGKSKAQDIQDFHDEMHRQILAGVDHEDLKISFRVFDRILKNLENKE
Nucleotide
Download Length: 441 bp
>NTDB_id=36200 GALLO_RS06750 WP_012962070.1 1358251..1358691(-) (rcrR) [Streptococcus gallolyticus UCN34]
ATGCACAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAATGGAAAATCGTGTCCACGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTAGCTGGTCCACAGGGATTTGCAGTGATGTATCTTCGTGATAATCCCGATAAAGAAATTTATA
TTAAGGACATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAGTTGTTTCGTCAAAAGAAGATAAGCGTTATAAGCAAGTTGTGTTGACTGAGCTTGGAAAATCAAAGGCTCAGGA
TATTCAAGATTTCCATGATGAAATGCATAGGCAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATCTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA
ATGCACAAGAAAGATCCGTTTTCACAGTTTAGGGATTTTATCAATTTAATGGAAAATCGTGTCCACGCTCTTGCGGAAAG
TCATGGTGTTGAAAATCTAGCTGGTCCACAGGGATTTGCAGTGATGTATCTTCGTGATAATCCCGATAAAGAAATTTATA
TTAAGGACATTGAGAAGAGACTAAGAATTTCAAAGTCAGTGACTAGTAATTTGATTAAGCGCATGGAGAAAAATGGTTTT
ATCCAAGTTGTTTCGTCAAAAGAAGATAAGCGTTATAAGCAAGTTGTGTTGACTGAGCTTGGAAAATCAAAGGCTCAGGA
TATTCAAGATTTCCATGATGAAATGCATAGGCAAATCTTAGCTGGTGTTGACCATGAGGATCTCAAAATCTCGTTTCGCG
TCTTTGACCGCATTTTGAAAAATTTAGAAAACAAGGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
56.643 |
97.945 |
0.555 |