Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | FDN00_RS18920 | Genome accession | NZ_CP040084 |
| Coordinates | 3941498..3942025 (-) | Length | 175 a.a. |
| NCBI ID | WP_000695065.1 | Uniprot ID | N9K1N5 |
| Organism | Acinetobacter baumannii strain VB33071 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3936498..3947025
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDN00_RS18900 (FDN00_18900) | - | 3936682..3937557 (-) | 876 | WP_137326925.1 | hypothetical protein | - |
| FDN00_RS18905 (FDN00_18905) | aroB | 3937573..3938655 (-) | 1083 | WP_001193997.1 | 3-dehydroquinate synthase | - |
| FDN00_RS18910 (FDN00_18910) | aroK | 3938684..3939253 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| FDN00_RS18915 (FDN00_18915) | pilQ | 3939265..3941430 (-) | 2166 | WP_001017033.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| FDN00_RS18920 (FDN00_18920) | pilP | 3941498..3942025 (-) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| FDN00_RS18925 (FDN00_18925) | pilO | 3942036..3942776 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FDN00_RS18930 (FDN00_18930) | pilN | 3942773..3943414 (-) | 642 | WP_000201227.1 | PilN domain-containing protein | Machinery gene |
| FDN00_RS18935 (FDN00_18935) | pilM | 3943414..3944472 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19419.64 Da Isoelectric Point: 8.9898
>NTDB_id=361980 FDN00_RS18920 WP_000695065.1 3941498..3942025(-) (pilP) [Acinetobacter baumannii strain VB33071]
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=361980 FDN00_RS18920 WP_000695065.1 3941498..3942025(-) (pilP) [Acinetobacter baumannii strain VB33071]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCAGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACATTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GCATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCAGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACATTGGTCTTGATTGGGCCTGCACCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |