Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | FDM99_RS03945 | Genome accession | NZ_CP040080 |
| Coordinates | 804323..804649 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain SP304 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 799323..809649
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDM99_RS03920 (FDM99_03920) | hemC | 799940..800857 (+) | 918 | WP_032027039.1 | hydroxymethylbilane synthase | - |
| FDM99_RS03925 (FDM99_03925) | - | 800862..801629 (+) | 768 | WP_032027038.1 | uroporphyrinogen-III synthase | - |
| FDM99_RS03930 (FDM99_03930) | - | 801638..802477 (+) | 840 | WP_001230201.1 | hypothetical protein | - |
| FDM99_RS03935 (FDM99_03935) | - | 802487..803680 (+) | 1194 | WP_000681771.1 | hypothetical protein | - |
| FDM99_RS03940 (FDM99_03940) | - | 803688..804128 (+) | 441 | WP_032047214.1 | acyl-CoA thioesterase | - |
| FDM99_RS03945 (FDM99_03945) | hns | 804323..804649 (+) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| FDM99_RS03950 (FDM99_03950) | gspN | 804980..805723 (+) | 744 | WP_000730343.1 | type II secretion system protein N | - |
| FDM99_RS03955 (FDM99_03955) | - | 805723..806559 (+) | 837 | WP_000870031.1 | type II secretion system protein N | - |
| FDM99_RS03960 (FDM99_03960) | gspD | 806601..808877 (+) | 2277 | WP_137344807.1 | type II secretion system secretin GspD | - |
| FDM99_RS03965 (FDM99_03965) | - | 808918..809547 (+) | 630 | WP_032027036.1 | FHA domain-containing protein | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=361916 FDM99_RS03945 WP_000801427.1 804323..804649(+) (hns) [Acinetobacter baumannii strain SP304]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=361916 FDM99_RS03945 WP_000801427.1 804323..804649(+) (hns) [Acinetobacter baumannii strain SP304]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |