Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GALLO_RS02075 Genome accession   NC_013798
Coordinates   387601..388326 (+) Length   241 a.a.
NCBI ID   WP_009853437.1    Uniprot ID   A0A060RHE2
Organism   Streptococcus gallolyticus UCN34     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 382601..393326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GALLO_RS02045 (GALLO_0354) - 382979..384400 (+) 1422 WP_012961429.1 NCS2 family permease -
  GALLO_RS02050 (GALLO_0355) tsaE 384585..385028 (+) 444 WP_009853432.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GALLO_RS02055 (GALLO_0356) - 385021..385533 (+) 513 WP_009853433.1 GNAT family N-acetyltransferase -
  GALLO_RS02060 (GALLO_0357) brpA 385544..386701 (+) 1158 WP_009853434.1 biofilm formation/cell division transcriptional regulator BrpA -
  GALLO_RS02065 (GALLO_0358) - 386819..387121 (-) 303 WP_009853435.1 hypothetical protein -
  GALLO_RS02070 (GALLO_0359) - 387118..387537 (-) 420 WP_009853436.1 HIT family protein -
  GALLO_RS02075 (GALLO_0360) pptA 387601..388326 (+) 726 WP_009853437.1 ABC transporter ATP-binding protein Regulator
  GALLO_RS02080 (GALLO_0361) - 388328..389362 (+) 1035 WP_009853438.1 ABC transporter permease -
  GALLO_RS02085 (GALLO_0362) ccrZ 389427..390221 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  GALLO_RS02090 (GALLO_0363) trmB 390221..390859 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GALLO_RS02100 (GALLO_0364) - 391202..392227 (+) 1026 WP_012961431.1 GGDEF domain-containing protein -
  GALLO_RS02105 (GALLO_0365) - 392233..393300 (+) 1068 WP_009853440.1 bifunctional glycosyltransferase family 2/GtrA family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26751.00 Da        Isoelectric Point: 4.3757

>NTDB_id=36180 GALLO_RS02075 WP_009853437.1 387601..388326(+) (pptA) [Streptococcus gallolyticus UCN34]
MLKIENVTGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQDQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHQGQIRATGTLAELREAFGDETATLNDIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=36180 GALLO_RS02075 WP_009853437.1 387601..388326(+) (pptA) [Streptococcus gallolyticus UCN34]
ATGTTAAAAATTGAAAATGTAACTGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGACGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATCGGACTTTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGGATCAGGCGGAATATCGTAAGAAAATCGGATTTATCCCA
GAAACGCCAAGTTTATATGAAGAACTGACTTTACGTGAACATTTAGAAACGGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCGATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTCAATCCAAGTTTGTTTATCGTTGATGAACCCTTT
TTGGGATTGGACCCATTAGCGATTTCTGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAGGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCAAGGGCAAATTCGTGCGACTG
GTACATTAGCAGAGCTACGTGAAGCTTTTGGTGATGAGACAGCAACGCTTAATGATATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A060RHE2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

80.335

99.17

0.797
  pptA Streptococcus thermophilus LMD-9

79.916

99.17

0.793

Multiple sequence alignment