Detailed information
Bioinformatically predicted
Overview
| Name | hns | Type | Regulator |
| Locus tag | FDF20_RS00140 | Genome accession | NZ_CP040050 |
| Coordinates | 27360..27686 (+) | Length | 108 a.a. |
| NCBI ID | WP_000801427.1 | Uniprot ID | N9J3X5 |
| Organism | Acinetobacter baumannii strain VB16141 | ||
| Function | repress the expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 22360..32686
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDF20_RS00115 (FDF20_00115) | hemC | 22977..23894 (+) | 918 | WP_002159654.1 | hydroxymethylbilane synthase | - |
| FDF20_RS00120 (FDF20_00120) | - | 23899..24666 (+) | 768 | WP_000897410.1 | uroporphyrinogen-III synthase | - |
| FDF20_RS00125 (FDF20_00125) | - | 24675..25514 (+) | 840 | WP_045544628.1 | hypothetical protein | - |
| FDF20_RS00130 (FDF20_00130) | - | 25524..26717 (+) | 1194 | WP_045544627.1 | membrane protein | - |
| FDF20_RS00135 (FDF20_00135) | - | 26725..27165 (+) | 441 | WP_000661569.1 | acyl-CoA thioesterase | - |
| FDF20_RS00140 (FDF20_00140) | hns | 27360..27686 (+) | 327 | WP_000801427.1 | H-NS family nucleoid-associated regulatory protein | Regulator |
| FDF20_RS00145 (FDF20_00145) | gspN | 28019..28763 (+) | 745 | Protein_28 | type II secretion system protein N | - |
| FDF20_RS00150 (FDF20_00150) | - | 28763..29599 (+) | 837 | WP_045544625.1 | type II secretion system protein N | - |
| FDF20_RS00155 (FDF20_00155) | gspD | 29641..31911 (+) | 2271 | WP_045544624.1 | type II secretion system secretin GspD | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12462.12 Da Isoelectric Point: 5.0524
>NTDB_id=361790 FDF20_RS00140 WP_000801427.1 27360..27686(+) (hns) [Acinetobacter baumannii strain VB16141]
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQKRKKTTRKSVEPRYRNKNNAE
ETWTGRGKQPRWLVAEIEKGAKLEDFLI
Nucleotide
Download Length: 327 bp
>NTDB_id=361790 FDF20_RS00140 WP_000801427.1 27360..27686(+) (hns) [Acinetobacter baumannii strain VB16141]
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
ATGAAACCGGATATTAGTGAATTATCTGTTGAAGAGTTAAAACGCTTACAAGAAGAAGCAGAAGCTTTAATTGCAAGCAA
AAAAGATCAAGCAATCGAAGATGCTTATAATCAAATTATCGAAATTGCTGAAAATGTAGGTTTTAGTGTTGAACAGCTTC
TAGAATTTGGCGCTCAAAAACGTAAGAAAACAACACGTAAATCTGTAGAACCACGTTACCGTAACAAAAACAATGCTGAA
GAGACTTGGACTGGTCGCGGTAAACAACCACGTTGGTTAGTTGCTGAAATTGAAAAAGGTGCAAAACTTGAAGATTTCTT
AATCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hns | Acinetobacter baumannii strain A118 |
100 |
100 |
1 |