Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSNT_RS15420 Genome accession   NC_017196
Coordinates   2874854..2875549 (-) Length   231 a.a.
NCBI ID   WP_014480621.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto BEST195     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2869854..2880549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSNT_RS15400 (BSNT_04424) yttA 2870281..2871027 (+) 747 WP_014480618.1 LMBR1 domain-containing protein -
  BSNT_RS15405 (BSNT_04426) bceB 2871064..2873004 (-) 1941 WP_014480619.1 bacitracin ABC transporter permease BceB -
  BSNT_RS15410 (BSNT_04427) bceA 2872994..2873755 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  BSNT_RS15415 (BSNT_04428) bceS 2873857..2874861 (-) 1005 WP_014480620.1 two-component sensor histidine kinase BceS -
  BSNT_RS15420 (BSNT_04429) braR 2874854..2875549 (-) 696 WP_014480621.1 two-component response regulator BceR Regulator
  BSNT_RS15425 (BSNT_04431) ytrF 2875646..2876956 (-) 1311 WP_014480622.1 ABC transporter permease YtrF -
  BSNT_RS15430 (BSNT_04432) ytrE 2876946..2877641 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  BSNT_RS15435 (BSNT_04433) ytrD 2877656..2878633 (-) 978 WP_014480623.1 ABC transporter permease YtrD -
  BSNT_RS15440 (BSNT_04434) - 2878665..2879651 (-) 987 WP_014480624.1 ABC transporter permease subunit -
  BSNT_RS15445 (BSNT_04436) ytrB 2879645..2880523 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26908.74 Da        Isoelectric Point: 5.3731

>NTDB_id=36175 BSNT_RS15420 WP_014480621.1 2874854..2875549(-) (braR) [Bacillus subtilis subsp. natto BEST195]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=36175 BSNT_RS15420 WP_014480621.1 2874854..2875549(-) (braR) [Bacillus subtilis subsp. natto BEST195]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment