Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   E3T00_RS10155 Genome accession   NZ_CP047784
Coordinates   2079619..2080089 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain UP_1209     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2074619..2085089
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3T00_RS10135 (E3T00_10135) coaW 2074929..2075732 (+) 804 WP_000862728.1 type II pantothenate kinase -
  E3T00_RS10140 (E3T00_10140) - 2075862..2076532 (-) 671 Protein_1954 DUF2750 domain-containing protein -
  E3T00_RS10145 (E3T00_10145) ldmS 2076931..2078124 (-) 1194 WP_000183726.1 L-aspartate--L-methionine ligase LdmS -
  E3T00_RS10150 (E3T00_10150) - 2078124..2079308 (-) 1185 WP_001291497.1 M20 family metallopeptidase -
  E3T00_RS10155 (E3T00_10155) luxS 2079619..2080089 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  E3T00_RS10160 (E3T00_10160) - 2080241..2080591 (-) 351 WP_001024035.1 membrane protein -
  E3T00_RS10165 (E3T00_10165) - 2080605..2081906 (-) 1302 WP_001242311.1 pyrimidine-nucleoside phosphorylase -
  E3T00_RS10170 (E3T00_10170) deoC 2082187..2082849 (-) 663 WP_160198963.1 deoxyribose-phosphate aldolase -
  E3T00_RS10175 (E3T00_10175) deoD 2083164..2083874 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  E3T00_RS10180 (E3T00_10180) - 2083995..2084438 (-) 444 WP_000070865.1 Dps family protein -
  E3T00_RS10185 (E3T00_10185) - 2084638..2085051 (-) 414 WP_001123300.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=361710 E3T00_RS10155 WP_000164421.1 2079619..2080089(+) (luxS) [Staphylococcus aureus strain UP_1209]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=361710 E3T00_RS10155 WP_000164421.1 2079619..2080089(+) (luxS) [Staphylococcus aureus strain UP_1209]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCCG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404