Detailed information NTG0361681

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: FCN78_RS08300
• Genome accession: NZ_CP040021
• Coordinates: 1752975..1756379 (+)
• Length: 1134 a.a.
• NCBI ID: WP_077659700.1
• Uniprot ID: A0AB36JWK2
• Organism: Salinivibrio kushneri strain AL184
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1747975..1761379

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FCN78_RS08290 (FCN78_08290)	rluC	1748073..1749023 (-)	951	WP_077605373.1	23S rRNA pseudouridine(955/2504/2580) synthase RluC	-
FCN78_RS08295 (FCN78_08295)	rne	1749718..1752666 (+)	2949	WP_077659688.1	ribonuclease E	-
FCN78_RS08300 (FCN78_08300)	chiS	1752975..1756379 (+)	3405	WP_077659700.1	response regulator	Regulator
FCN78_RS08305 (FCN78_08305)	-	1757347..1759035 (+)	1689	WP_069362207.1	ABC transporter substrate-binding protein	-
FCN78_RS08310 (FCN78_08310)	-	1759119..1760111 (+)	993	WP_069362206.1	ABC transporter permease	-
FCN78_RS08315 (FCN78_08315)	-	1760108..1761136 (+)	1029	WP_077649898.1	ABC transporter permease	-

Sequence

Protein

• Length: 1134 a.a.
• Molecular weight: 127303.67 Da
• Isoelectric Point: 6.7842

>NTDB_id=361681 FCN78_RS08300 WP_077659700.1 1752975..1756379(+) (chiS) [Salinivibrio kushneri strain AL184]
MKSLFTAYPFKRLHHTLMLAFLLLSLLPLIVVALFFLNAHSQDLQEQSTAHLLSVRDSKQQQVNDYFAAKEAEVLGFVAS
ELAYASGGHFYGLVNAFQRLRPNIDAARDYAQRRYYLGSGERVKTPVPKDDPHYSATERYRLLHKRYHRAYQALIARADF
DDLLLVDKQGNVTYSVKKLGNFGTNLLSDPHRNARLGQTFAALKQQTQQTKGKLDPTPKVIISDFSAEETDAPVAWLGAP
IIQQGYLHSYALFRLPNHALTKLMAPRETNAIETHLVGDDGKTRAHLTSKSQLISNTPAVEKAIAGETGVTRYQTQSGQT
MLAAYTPIRTHGLKWGLVAEVPTQVAYARIHQLQQLFIVAMLLAILAVVIASHYMSNFITRPLLQLTWAAEKVSAGDLDT
QIHHTRRRDEIGRLAISFARMRHAIREKLDLIRQQNQTLEANITTIRAQNEELHVANKLKDEFLATTSHELRTPLHGMIG
IAEALIDGANGPISRDHQYQLSIIVNSGQRLAKLVDDLLDYHKMRYGQLDLEQGPVNLNAITQLVLSLAKHLKKDKPLEI
INQLSDTPIWVHADPQRLEQVMYNLLGNAIKFTDAGKIVISADTLDDRVRIQVVDTGKGIPAEQLSTIFEPLAQAVSSHY
HYQHGAGLGLSISRQLVELMGGQLYVSSQPQVGTTFSFTLPRVDEPPVLSTELTAFSTQHIHRDDTREALVHAASEAVEQ
SSKNNGLHILVVDDEPTNQQVLTSFLNIEGYQVNTASDGRTAIDHIATTKPDLILLDVLMPGMSGFEVCEQLRERFDHAA
LPIIMLTALNQPDDRIYGFEVGANDYLCKPFDKRELAARIATHLAASQAEQRRQENQRLEQALEQSAHQQASLLETQSWL
ISQLSLAPEAMLGMRRDGQVRFVNQAAASLFGREQDEVKRMHGQALVKAPEQANHMERYQGPLTIYIEGQPQDVDGMLLR
FPAESDIDSLYVINTDAPVSQSRIQSLESAIEALSGYALGGDSRQLETLKAMGGEFEALAEKAQHQQQDKTNTRRQLIVD
AMVASLDYWEEATGKSKFDFAEQSGLWRVYLDRSSLQTRTLDKYLLIETLPKTPRWRTVLSSIRFILDHCDKRSPTRTQL
ESYYQQLRQLLLED

Nucleotide

• Length: 3405 bp

>NTDB_id=361681 FCN78_RS08300 WP_077659700.1 1752975..1756379(+) (chiS) [Salinivibrio kushneri strain AL184]
ATGAAATCCTTGTTTACTGCTTACCCATTTAAACGCCTCCATCACACCTTGATGCTGGCCTTTCTGCTACTGAGTCTCCT
CCCTCTCATCGTGGTCGCTTTGTTTTTTCTCAACGCCCATAGCCAAGATCTCCAAGAGCAAAGCACAGCACACCTTTTAT
CGGTTCGCGACAGTAAGCAACAGCAAGTCAACGATTATTTTGCTGCCAAAGAGGCGGAAGTCCTTGGGTTTGTCGCCTCG
GAGCTAGCCTACGCCAGTGGTGGTCATTTTTATGGTTTGGTCAATGCGTTTCAGCGACTACGACCAAACATCGACGCGGC
ACGTGACTACGCGCAACGTCGCTATTATCTTGGGTCCGGTGAAAGGGTTAAAACGCCTGTGCCCAAGGACGATCCCCATT
ATTCCGCCACCGAGCGTTATCGGCTGCTCCATAAACGCTATCACCGCGCTTATCAAGCTTTGATCGCTCGCGCCGATTTT
GACGACTTACTCTTGGTCGACAAGCAAGGCAACGTCACCTATTCGGTGAAAAAGCTGGGCAACTTTGGCACTAACTTACT
CTCAGACCCGCATCGTAATGCACGATTAGGGCAGACGTTCGCGGCCCTGAAACAGCAAACGCAACAGACAAAAGGGAAGT
TAGATCCGACCCCTAAGGTGATTATCTCGGACTTTTCCGCTGAAGAGACCGACGCCCCGGTGGCATGGCTTGGCGCCCCT
ATTATTCAGCAAGGGTATCTGCATAGCTACGCGCTGTTCCGGCTTCCTAACCATGCCCTTACTAAGCTGATGGCACCTAG
AGAAACCAATGCGATTGAAACGCACCTCGTCGGCGATGATGGCAAGACTCGAGCGCATTTAACCAGCAAAAGTCAGCTGA
TCAGTAACACGCCTGCCGTAGAAAAAGCCATAGCCGGAGAAACGGGTGTCACCCGCTATCAAACCCAGTCAGGCCAAACC
ATGCTCGCCGCTTACACCCCCATTCGCACCCACGGCCTGAAATGGGGACTCGTGGCTGAAGTCCCCACGCAAGTCGCCTA
CGCACGTATCCACCAGCTACAACAGCTTTTTATCGTCGCCATGTTACTTGCGATTCTCGCGGTGGTGATTGCCTCGCACT
ATATGTCCAACTTTATTACTCGCCCACTGCTTCAGCTTACATGGGCGGCCGAAAAAGTCAGTGCGGGTGACCTTGATACC
CAAATCCACCACACGCGTCGTCGTGATGAAATCGGGCGTTTGGCGATTAGCTTTGCCCGTATGCGCCATGCCATTCGCGA
AAAACTAGACTTAATCCGCCAGCAGAATCAGACCTTAGAAGCTAACATCACCACCATACGTGCTCAGAATGAAGAGCTGC
ATGTCGCCAACAAGCTGAAAGATGAATTCTTGGCCACCACCTCTCATGAACTTCGCACTCCATTACACGGCATGATAGGG
ATTGCCGAAGCACTGATTGACGGTGCGAACGGTCCGATTAGTCGCGACCATCAGTATCAACTGTCGATTATCGTCAACAG
CGGCCAGCGCTTGGCCAAGCTGGTCGATGACCTCTTGGACTACCACAAAATGCGCTATGGGCAATTAGACTTGGAGCAAG
GCCCTGTCAACCTCAATGCCATCACTCAGCTTGTGCTGTCACTCGCCAAGCACCTTAAAAAAGATAAGCCGCTAGAAATC
ATTAATCAGCTCAGCGACACGCCAATCTGGGTACACGCAGATCCCCAACGCCTTGAGCAAGTTATGTACAATTTACTGGG
AAATGCGATTAAGTTCACCGATGCGGGTAAGATTGTTATTAGCGCCGACACCTTGGACGATCGCGTTCGCATCCAAGTGG
TTGACACGGGTAAAGGGATCCCCGCAGAACAGTTAAGTACCATTTTTGAGCCGCTCGCACAAGCAGTAAGTAGCCACTAT
CATTATCAACACGGCGCAGGTCTTGGTCTCTCCATCAGTCGTCAACTTGTCGAGCTGATGGGCGGCCAGCTTTACGTCAG
CAGCCAGCCACAAGTGGGCACCACCTTTAGCTTCACCCTTCCGCGTGTCGATGAGCCCCCGGTGTTGAGCACCGAGCTTA
CCGCCTTCTCTACCCAGCACATTCATCGAGATGACACGAGAGAGGCGCTCGTTCACGCCGCTTCGGAAGCCGTTGAACAA
AGTAGTAAGAACAACGGGTTACATATTTTAGTCGTCGATGATGAGCCCACCAATCAACAAGTACTCACCAGCTTTCTAAA
TATTGAAGGCTATCAGGTCAATACAGCAAGCGATGGGCGCACAGCGATTGATCATATCGCCACCACAAAGCCAGATCTCA
TCTTACTCGACGTGCTCATGCCCGGCATGAGTGGGTTCGAGGTCTGCGAGCAGCTGCGAGAGCGCTTTGACCATGCTGCC
CTTCCGATTATCATGCTGACCGCCTTAAATCAGCCTGATGATCGCATCTATGGCTTTGAGGTCGGCGCCAATGATTACCT
CTGTAAGCCCTTTGACAAAAGAGAGCTTGCCGCACGGATAGCCACACATCTTGCCGCCAGCCAAGCGGAACAACGCCGCC
AAGAAAACCAACGCCTCGAGCAGGCACTTGAACAAAGTGCCCACCAACAAGCCAGCCTACTTGAAACCCAGTCTTGGTTG
ATTTCACAGCTCTCTCTCGCCCCTGAAGCCATGTTAGGTATGCGAAGAGATGGCCAGGTTCGCTTTGTTAACCAAGCGGC
AGCCTCCTTATTTGGGCGTGAACAGGACGAGGTAAAACGGATGCACGGTCAAGCCTTAGTGAAAGCGCCCGAGCAGGCCA
ATCATATGGAGCGCTATCAAGGCCCACTGACCATTTATATTGAAGGACAACCCCAAGACGTTGACGGTATGCTGCTGCGT
TTTCCAGCCGAGTCTGACATTGATAGCCTGTATGTCATCAACACAGACGCGCCCGTGTCTCAGTCTCGTATACAGAGCCT
AGAAAGCGCCATCGAAGCCTTATCTGGCTACGCATTAGGCGGAGACTCGCGCCAACTTGAAACGCTTAAAGCGATGGGCG
GGGAATTTGAAGCCCTTGCGGAAAAAGCGCAACACCAACAGCAAGATAAAACCAACACACGTAGACAGCTAATTGTTGAT
GCCATGGTAGCCAGCTTAGATTACTGGGAAGAAGCCACAGGCAAAAGCAAATTCGATTTTGCCGAGCAAAGTGGTCTCTG
GCGCGTCTACCTTGATCGTAGTAGCTTACAAACCCGCACACTGGATAAGTACCTGCTCATCGAAACCCTGCCAAAAACCC
CGCGGTGGCGCACGGTGCTGAGCTCCATTCGCTTTATCCTCGATCATTGCGATAAACGCAGTCCGACCCGCACTCAGCTG
GAGTCCTATTACCAACAACTTCGCCAGCTACTGCTAGAAGACTAG

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (729-840)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	57.256	100	0.574