Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   FCN77_RS27730 Genome accession   NZ_CP040018
Coordinates   2961585..2962271 (+) Length   228 a.a.
NCBI ID   WP_368074272.1    Uniprot ID   -
Organism   Arthrobacter sp. 24S4-2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2956585..2967271
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FCN77_RS13600 (FCN77_13600) - 2957061..2959607 (-) 2547 WP_137322695.1 RNA helicase -
  FCN77_RS13605 (FCN77_13605) - 2959717..2960495 (+) 779 Protein_2750 trans-aconitate 2-methyltransferase -
  FCN77_RS27725 - 2960524..2961672 (+) 1149 WP_368074271.1 ABC transporter permease -
  FCN77_RS27730 rcrP 2961585..2962271 (+) 687 WP_368074272.1 ABC transporter ATP-binding protein Regulator
  FCN77_RS13615 (FCN77_13615) - 2962268..2964097 (+) 1830 WP_137322696.1 ABC transporter ATP-binding protein -
  FCN77_RS13620 (FCN77_13620) - 2964094..2964474 (+) 381 WP_137322697.1 GntR family transcriptional regulator -

Sequence


Protein


Download         Length: 228 a.a.        Molecular weight: 24339.75 Da        Isoelectric Point: 6.2406

>NTDB_id=361657 FCN77_RS27730 WP_368074272.1 2961585..2962271(+) (rcrP) [Arthrobacter sp. 24S4-2]
MLDGISFTAAPGTTTAIIGSTGSGKSTLLNLLPRFLDATSGEVMIGGHNVRSLPLHFLRDSLSVVPQRAYLFSGTVAGNL
RIGAPEASDEDLFRALRTAQAEDFVRDLPYGLDTAVTQGGTNFSGGQRQRLCIARALLREAPVYLFDDSLSALDYTTDAR
LRQALAPLVRRSTVIIVAERIATIVDAGLILVLDNGRLVSQGTHNELMRSSPVYQEIAASQLALGGQL

Nucleotide


Download         Length: 687 bp        

>NTDB_id=361657 FCN77_RS27730 WP_368074272.1 2961585..2962271(+) (rcrP) [Arthrobacter sp. 24S4-2]
GTGCTGGACGGCATCAGCTTCACGGCGGCGCCGGGCACTACCACTGCCATCATCGGTTCAACGGGCAGCGGCAAGTCCAC
CCTGCTGAACCTCCTGCCGCGGTTCCTGGACGCCACGTCCGGCGAGGTCATGATCGGCGGCCACAACGTCCGCTCCCTGC
CACTGCACTTCCTGCGGGACAGCCTGTCGGTGGTGCCCCAGCGCGCATACCTTTTCTCCGGCACCGTGGCCGGGAATCTC
AGGATCGGCGCCCCGGAGGCGAGCGACGAGGACCTTTTCCGTGCGCTCCGGACGGCCCAGGCGGAGGATTTCGTCCGGGA
TCTTCCGTACGGACTCGACACGGCGGTGACGCAGGGCGGAACGAACTTCTCCGGCGGACAGCGCCAGCGCCTGTGCATTG
CCCGCGCGCTGCTCCGGGAGGCGCCGGTCTACCTTTTTGACGACAGCCTCTCGGCACTCGATTACACCACCGATGCCCGC
CTCCGCCAGGCGCTGGCCCCGCTGGTCCGCCGGTCCACCGTGATCATCGTGGCCGAGCGCATCGCGACCATCGTCGACGC
AGGCCTCATCCTCGTCCTGGACAACGGCAGGCTCGTGTCCCAGGGCACGCACAACGAACTGATGCGCTCGTCGCCCGTGT
ACCAGGAAATCGCTGCTTCGCAGCTCGCGCTGGGCGGCCAGCTATGA

Domains


Predicted by InterproScan.

(2-149)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.655

99.123

0.522


Multiple sequence alignment