Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   FCL38_RS16285 Genome accession   NZ_CP040017
Coordinates   3932806..3933204 (-) Length   132 a.a.
NCBI ID   WP_137314647.1    Uniprot ID   A0A4P8HSZ5
Organism   Pseudoduganella umbonata strain DSMZ 26121     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3927806..3938204
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FCL38_RS16270 (FCL38_16270) - 3929425..3931776 (-) 2352 WP_137314644.1 methyl-accepting chemotaxis protein -
  FCL38_RS16275 (FCL38_16275) - 3931796..3932428 (-) 633 WP_137314645.1 chemotaxis protein CheW -
  FCL38_RS16280 (FCL38_16280) - 3932428..3932793 (-) 366 WP_137314646.1 response regulator transcription factor -
  FCL38_RS16285 (FCL38_16285) pilG 3932806..3933204 (-) 399 WP_137314647.1 PleD family two-component system response regulator Regulator
  FCL38_RS16290 (FCL38_16290) - 3933557..3933709 (-) 153 WP_131148850.1 rubredoxin -
  FCL38_RS16295 (FCL38_16295) - 3933829..3934680 (+) 852 WP_137314648.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  FCL38_RS16300 (FCL38_16300) hemL 3934677..3935963 (+) 1287 WP_137314649.1 glutamate-1-semialdehyde 2,1-aminomutase -
  FCL38_RS16305 (FCL38_16305) - 3936146..3936604 (+) 459 WP_137314650.1 cbb3-type cytochrome c oxidase subunit I -
  FCL38_RS16310 (FCL38_16310) corA 3936622..3937587 (-) 966 WP_131143941.1 magnesium/cobalt transporter CorA -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14130.32 Da        Isoelectric Point: 7.2427

>NTDB_id=361634 FCL38_RS16285 WP_137314647.1 3932806..3933204(-) (pilG) [Pseudoduganella umbonata strain DSMZ 26121]
MTTTPQANGLTIMVIDDSSTIRRSAEIFLSGAGYDVVLAEDGFDALAKIVDHQPALIFCDILMPRLDGYQTCALIKKSAK
FHATPVLMLSSRDGLFDRARGAMVGSAAYLTKPFSKDSLLAAVREHAGAGRP

Nucleotide


Download         Length: 399 bp        

>NTDB_id=361634 FCL38_RS16285 WP_137314647.1 3932806..3933204(-) (pilG) [Pseudoduganella umbonata strain DSMZ 26121]
ATGACGACGACGCCGCAAGCGAACGGTTTGACCATCATGGTGATCGATGACAGCAGCACGATCCGCCGGTCGGCCGAGAT
ATTCCTGAGCGGGGCCGGTTATGACGTGGTGCTTGCCGAGGACGGGTTCGATGCGCTGGCCAAGATCGTCGACCACCAGC
CGGCCCTGATTTTCTGTGACATCCTGATGCCCCGGCTGGACGGTTACCAGACCTGCGCGCTGATCAAGAAAAGCGCGAAA
TTCCATGCCACGCCCGTGCTGATGCTGTCGTCCAGGGACGGCCTGTTCGACCGCGCGCGCGGCGCGATGGTCGGCTCGGC
CGCCTACCTTACCAAACCCTTCAGCAAGGACAGCCTGCTGGCCGCGGTGCGCGAGCATGCCGGCGCCGGGCGTCCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4P8HSZ5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

60.331

91.667

0.553

Multiple sequence alignment