Detailed information NTG0361612

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: E8M85_RS06180
• Genome accession: NZ_CP040016
• Coordinates: 1156325..1157284 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain 9090
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1151325..1162284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E8M85_RS06155 (E8M85_06240)	neuC	1151888..1153003 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
E8M85_RS09285	-	1153000..1153914 (+)	915	Protein_1197	beta-1,4-N-acetylgalactosaminyltransferase	-
E8M85_RS09290	-	1153948..1154610 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
E8M85_RS06170 (E8M85_06250)	-	1154605..1155458 (-)	854	Protein_1199	glycosyltransferase	-
E8M85_RS06175 (E8M85_06255)	waaV	1155442..1156266 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
E8M85_RS06180 (E8M85_06260)	waaF	1156325..1157284 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
E8M85_RS06185 (E8M85_06265)	gmhA	1157265..1157825 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
E8M85_RS06190 (E8M85_06270)	rfaE1	1157822..1159207 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
E8M85_RS06195 (E8M85_06275)	rfaD	1159200..1160153 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
E8M85_RS06200 (E8M85_06280)	gmhB	1160154..1160714 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
E8M85_RS06205 (E8M85_06285)	-	1160796..1161098 (+)	303	WP_002852762.1	cytochrome c	-
E8M85_RS06210 (E8M85_06290)	ccoS	1161121..1161327 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=361612 E8M85_RS06180 WP_002875425.1 1156325..1157284(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 9090]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=361612 E8M85_RS06180 WP_002875425.1 1156325..1157284(+) (waaF) [Campylobacter jejuni subsp. jejuni strain 9090]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1